Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RPL39P62891 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 RN7SKP269-201ENST00000365545 319 ntBASIC2.99□□□□□ -1.93
RPL39P62891 RNA5SP332-201ENST00000391063 115 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 COX6B1P1-201ENST00000415962 213 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 LYPLA1P1-201ENST00000434514 622 ntBASIC2.99□□□□□ -1.93
RPL39P62891 CEACAMP1-201ENST00000434624 1035 ntBASIC2.99□□□□□ -1.93
RPL39P62891 KRTAP8-2P-201ENST00000440620 186 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC2.99□□□□□ -1.93
RPL39P62891 MTND2P25-201ENST00000449028 610 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 RPL23AP2-201ENST00000471227 466 ntBASIC2.99□□□□□ -1.93
RPL39P62891 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC2.99□□□□□ -1.93
RPL39P62891 AC006499.3-201ENST00000506077 748 ntBASIC2.99□□□□□ -1.93
RPL39P62891 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AP002981.1-201ENST00000517692 975 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 OR5M2P-201ENST00000529003 936 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 AC006064.5-201ENST00000541782 248 ntBASIC2.99□□□□□ -1.93
RPL39P62891 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC2.99□□□□□ -1.93
RPL39P62891 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC2.99□□□□□ -1.93
RPL39P62891 AL109766.1-201ENST00000555080 552 ntBASIC2.99□□□□□ -1.93
RPL39P62891 OR1F2P-201ENST00000570470 933 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 AL031320.1-201ENST00000604177 357 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AL021997.2-201ENST00000615674 271 ntBASIC2.99□□□□□ -1.93
RPL39P62891 LINC00901.1-201ENST00000617252 152 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 AC087385.3-201ENST00000620477 187 ntBASIC2.99□□□□□ -1.93
RPL39P62891 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.99□□□□□ -1.93
RPL39P62891 AL359715.5-201ENST00000623431 443 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AL356121.2-201ENST00000624715 780 ntBASIC2.99□□□□□ -1.93
RPL39P62891 AC099654.11-201ENST00000638857 294 ntBASIC2.99□□□□□ -1.93
RPL39P62891 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.99□□□□□ -1.93
RPL39P62891 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
RPL39P62891 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
RPL39P62891 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RPL39P62891 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC2.99□□□□□ -1.93
RPL39P62891 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.99□□□□□ -1.93
RPL39P62891 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
RPL39P62891 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
RPL39P62891 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.98□□□□□ -1.93
RPL39P62891 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 GNAS-202ENST00000306090 477 ntTSL 5 BASIC2.98□□□□□ -1.93
RPL39P62891 FAM3C2-201ENST00000312214 681 ntBASIC2.98□□□□□ -1.93
RPL39P62891 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.98□□□□□ -1.93
RPL39P62891 RNU6ATAC5P-201ENST00000388104 126 ntBASIC2.98□□□□□ -1.93
RPL39P62891 MIR3065-201ENST00000390137 79 ntBASIC2.98□□□□□ -1.93
RPL39P62891 RN7SKP213-201ENST00000410746 298 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.98□□□□□ -1.93
RPL39P62891 EIF1P3-201ENST00000423841 334 ntBASIC2.98□□□□□ -1.93
RPL39P62891 SCP2-206ENST00000430330 938 ntTSL 2 BASIC2.98□□□□□ -1.93
RPL39P62891 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC2.98□□□□□ -1.93
RPL39P62891 HMGB1P16-201ENST00000447155 540 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AC144530.1-201ENST00000452862 555 ntBASIC2.98□□□□□ -1.93
RPL39P62891 RNU6ATAC28P-201ENST00000459249 118 ntBASIC2.98□□□□□ -1.93
RPL39P62891 RPL7P16-201ENST00000479738 738 ntBASIC2.98□□□□□ -1.93
RPL39P62891 F11-205ENST00000492972 1204 ntTSL 2 BASIC2.98□□□□□ -1.93
RPL39P62891 PPM1AP1-201ENST00000502740 1135 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.98□□□□□ -1.93
RPL39P62891 VWA8P1-201ENST00000510889 176 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.98□□□□□ -1.93
RPL39P62891 OR5AZ1P-201ENST00000527448 943 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AP001781.1-201ENST00000530977 207 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AC007225.2-201ENST00000562529 256 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AC068020.1-201ENST00000594215 661 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AL354984.3-201ENST00000604803 325 ntBASIC2.98□□□□□ -1.93
RPL39P62891 AL121873.1-201ENST00000616013 524 ntBASIC2.98□□□□□ -1.93
RPL39P62891 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC2.98□□□□□ -1.93
RPL39P62891 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC2.98□□□□□ -1.93
RPL39P62891 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 AL592182.3-201ENST00000642132 3304 ntBASIC2.98□□□□□ -1.93
RPL39P62891 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RPL39P62891 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.98□□□□□ -1.93
RPL39P62891 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.98□□□□□ -1.93
RPL39P62891 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.98□□□□□ -1.93
RPL39P62891 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 AC083899.2-201ENST00000423285 1376 ntBASIC2.98□□□□□ -1.93
RPL39P62891 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.98□□□□□ -1.93
RPL39P62891 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RPL39P62891 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RPL39P62891 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RPL39P62891 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms