Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CKS1BP61024 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CKS1BP61024 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 RNA5SP234-201ENST00000363916 119 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 LRRC37BP1-201ENST00000398851 714 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 GLULP6-201ENST00000399502 913 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 AL021331.1-201ENST00000402817 582 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 Z98941.1-201ENST00000407764 100 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC098592.2-201ENST00000413158 265 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 QRSL1P2-201ENST00000418582 964 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 OR6K4P-201ENST00000423179 955 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 MTCO1P54-201ENST00000430139 712 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 CYCSP12-201ENST00000437729 300 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 SUMO2P3-201ENST00000438311 288 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 AL162151.2-201ENST00000448875 158 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 AL136097.1-201ENST00000456945 913 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 RPS18P6-201ENST00000476880 458 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 SIAH1P1-201ENST00000479411 923 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 RPL7P39-201ENST00000481157 744 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 RPS21P4-201ENST00000487122 248 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.33□□□□□ -1.88
CKS1BP61024 TRAV31-201ENST00000502780 342 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 PSMA2P2-201ENST00000504319 686 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.33□□□□□ -1.88
CKS1BP61024 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 AC109635.6-201ENST00000525487 1113 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC005868.1-201ENST00000536421 331 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC022404.1-201ENST00000555320 273 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CKS1BP61024 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.33□□□□□ -1.88
CKS1BP61024 AC069307.1-201ENST00000602820 447 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 SUGT1P3-202ENST00000604259 383 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 MIR6780B-201ENST00000610307 79 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 AL391261.4-201ENST00000616012 481 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 AL049794.2-201ENST00000616301 365 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.33□□□□□ -1.88
CKS1BP61024 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CKS1BP61024 AL136164.3-201ENST00000624429 3978 ntBASIC3.33□□□□□ -1.88
CKS1BP61024 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.33□□□□□ -1.88
CKS1BP61024 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CKS1BP61024 RAD17P1-201ENST00000418130 2042 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 MAPK10-263ENST00000641052 4307 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CKS1BP61024 RNU4-7P-201ENST00000364758 141 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 RNU6-328P-201ENST00000390887 106 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 NUDT19P3-201ENST00000404698 555 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 MIR1182-201ENST00000408363 97 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AL390774.1-201ENST00000411924 246 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 AC092832.1-201ENST00000422934 400 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 AC115285.1-201ENST00000424879 736 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 CYCSP11-201ENST00000436426 315 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 HMGN1P36-201ENST00000446623 298 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 RPL31P15-201ENST00000449770 338 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AL691482.1-201ENST00000453255 87 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 RPL35AP19-201ENST00000469425 329 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 RN7SL799P-201ENST00000475891 298 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AC104971.1-201ENST00000495117 578 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.32□□□□□ -1.88
CKS1BP61024 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.32□□□□□ -1.88
CKS1BP61024 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 RNA5SP373-201ENST00000517271 95 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 IGHV3-63-201ENST00000518422 341 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 CYCSP28-201ENST00000534284 321 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 AC107958.1-201ENST00000556576 290 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AC110743.1-201ENST00000584870 478 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms