Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 AC092490.3-201ENST00000545370 572 ntBASIC4.05□□□□□ -1.76
ACTBP60709 HAUS8P1-201ENST00000549005 542 ntBASIC4.05□□□□□ -1.76
ACTBP60709 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.05□□□□□ -1.76
ACTBP60709 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 AC011447.4-201ENST00000587562 111 ntBASIC4.05□□□□□ -1.76
ACTBP60709 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.05□□□□□ -1.76
ACTBP60709 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.05□□□□□ -1.76
ACTBP60709 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.05□□□□□ -1.76
ACTBP60709 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.05□□□□□ -1.76
ACTBP60709 AC138627.1-204ENST00000641894 765 ntBASIC4.05□□□□□ -1.76
ACTBP60709 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
ACTBP60709 AC110792.3-201ENST00000595906 1614 ntBASIC4.05□□□□□ -1.76
ACTBP60709 AC093311.1-201ENST00000506586 2021 ntBASIC4.05□□□□□ -1.76
ACTBP60709 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
ACTBP60709 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.05□□□□□ -1.76
ACTBP60709 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ACTBP60709 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.04□□□□□ -1.76
ACTBP60709 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACTBP60709 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.04□□□□□ -1.76
ACTBP60709 AC068254.2-201ENST00000623938 3577 ntBASIC4.04□□□□□ -1.76
ACTBP60709 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ACTBP60709 SNURFL-201ENST00000309296 343 ntBASIC4.04□□□□□ -1.76
ACTBP60709 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
ACTBP60709 LAP3P1-201ENST00000403648 294 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.04□□□□□ -1.76
ACTBP60709 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.04□□□□□ -1.76
ACTBP60709 RPS17P8-201ENST00000434525 335 ntBASIC4.04□□□□□ -1.76
ACTBP60709 NDUFA5P8-201ENST00000449019 346 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AC006967.1-201ENST00000467608 589 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AC096741.1-201ENST00000472250 846 ntBASIC4.04□□□□□ -1.76
ACTBP60709 HMGN2P25-201ENST00000486956 268 ntBASIC4.04□□□□□ -1.76
ACTBP60709 RN7SL244P-201ENST00000493405 297 ntBASIC4.04□□□□□ -1.76
ACTBP60709 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ACTBP60709 AC006499.3-201ENST00000506077 748 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.04□□□□□ -1.76
ACTBP60709 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.04□□□□□ -1.76
ACTBP60709 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.04□□□□□ -1.76
ACTBP60709 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.04□□□□□ -1.76
ACTBP60709 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 OR10G5P-201ENST00000532733 358 ntBASIC4.04□□□□□ -1.76
ACTBP60709 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.04□□□□□ -1.76
ACTBP60709 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 FKBP1BP1-201ENST00000553366 325 ntBASIC4.04□□□□□ -1.76
ACTBP60709 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.04□□□□□ -1.76
ACTBP60709 AC091178.1-203ENST00000584586 279 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.04□□□□□ -1.76
ACTBP60709 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.04□□□□□ -1.76
ACTBP60709 AC090953.1-201ENST00000604305 1092 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AL121932.1-201ENST00000605542 214 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AC010424.2-201ENST00000607594 443 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.04□□□□□ -1.76
ACTBP60709 BX323046.1-201ENST00000610145 535 ntBASIC4.04□□□□□ -1.76
ACTBP60709 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.04□□□□□ -1.76
ACTBP60709 AC078899.5-201ENST00000612475 178 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 SNX18P1Y-201ENST00000616231 511 ntBASIC4.04□□□□□ -1.76
ACTBP60709 AC023509.5-201ENST00000617434 807 ntBASIC4.04□□□□□ -1.76
ACTBP60709 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACTBP60709 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.04□□□□□ -1.76
ACTBP60709 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACTBP60709 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
ACTBP60709 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.04□□□□□ -1.76
ACTBP60709 THAP12P4-201ENST00000528321 2266 ntBASIC4.04□□□□□ -1.76
ACTBP60709 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACTBP60709 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.03□□□□□ -1.76
ACTBP60709 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 CASC19-284ENST00000642142 1868 ntBASIC4.03□□□□□ -1.76
ACTBP60709 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
ACTBP60709 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.03□□□□□ -1.76
ACTBP60709 RN7SKP273-201ENST00000411392 314 ntBASIC4.03□□□□□ -1.76
ACTBP60709 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.03□□□□□ -1.76
ACTBP60709 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.03□□□□□ -1.76
ACTBP60709 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 AC069285.2-201ENST00000440210 275 ntBASIC4.03□□□□□ -1.76
ACTBP60709 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.03□□□□□ -1.76
ACTBP60709 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.03□□□□□ -1.76
ACTBP60709 AL163193.1-201ENST00000444895 788 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms