Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR7H2P-201ENST00000513483 306 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC010476.1-201ENST00000519111 851 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.07□□□□□ -1.44
RHBDL3P58872 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC093591.2-201ENST00000565254 3843 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC095057.3-201ENST00000567102 1157 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC115085.1-201ENST00000588924 229 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC104785.1-201ENST00000603220 588 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AL031320.1-201ENST00000604177 357 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC007786.3-201ENST00000615154 596 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC023509.5-201ENST00000617434 807 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AL669942.2-201ENST00000620352 697 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC010872.1-201ENST00000624225 675 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 OR2L1P-202ENST00000641567 1023 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.07□□□□□ -1.44
RHBDL3P58872 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RHBDL3P58872 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.06□□□□□ -1.44
RHBDL3P58872 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 USP9YP4-201ENST00000424401 1745 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
RHBDL3P58872 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RHBDL3P58872 SNORA70.6-201ENST00000383934 134 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 UBE2V1P9-201ENST00000414760 368 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 RPL26P29-201ENST00000415623 438 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 OR13Z1P-201ENST00000416141 834 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AC234782.4-201ENST00000417646 1048 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AC019050.1-201ENST00000418508 492 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDL3P58872 RPL19P16-201ENST00000433839 588 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 RPS20P1-201ENST00000434853 354 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDL3P58872 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDL3P58872 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDL3P58872 OR7E125P-201ENST00000443450 846 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.06□□□□□ -1.44
RHBDL3P58872 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.06□□□□□ -1.44
RHBDL3P58872 TCEA1P1-201ENST00000449716 880 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 GTF2IP12-201ENST00000456547 356 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 HPRT1P2-201ENST00000505250 544 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AC092709.1-201ENST00000521355 1045 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 OR8A2P-201ENST00000528631 952 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AC107918.3-201ENST00000533272 382 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 AC137768.1-201ENST00000549998 553 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 NMNAT1P1-201ENST00000554095 876 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 MIR4737-201ENST00000583979 81 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDL3P58872 BNIP3P27-201ENST00000599991 412 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AP002906.1-201ENST00000603405 233 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 BNIP3P35-201ENST00000604530 490 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 uc_338.18-201ENST00000615451 175 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AP003400.6-201ENST00000624698 740 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
RHBDL3P58872 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 AC134882.1-201ENST00000603738 1676 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 AC046144.1-201ENST00000478559 1853 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RHBDL3P58872 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.06□□□□□ -1.44
RHBDL3P58872 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.06□□□□□ -1.44
RHBDL3P58872 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RHBDL3P58872 TCP11X1-202ENST00000622971 1372 ntBASIC6.06□□□□□ -1.44
RHBDL3P58872 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RHBDL3P58872 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDL3P58872 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDL3P58872 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC012618.3-205ENST00000637896 1496 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 RNU6-543P-201ENST00000362576 108 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 RNU6-1339P-201ENST00000363574 91 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AL512430.2-201ENST00000406786 339 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms