Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC004241.3-201ENST00000611728 517 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AL162574.2-201ENST00000614618 657 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AC234782.5-201ENST00000617723 324 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 VPS35P1-201ENST00000563400 1518 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AL121950.1-201ENST00000624993 2077 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK2P53671 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.79□□□□□ -1.64
LIMK2P53671 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LIMK2P53671 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 AL589655.1-201ENST00000405398 482 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 OR13Z1P-201ENST00000416141 834 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC019050.1-201ENST00000418508 492 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 LINC00993-201ENST00000420453 540 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 RPL7P57-201ENST00000423238 740 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 FABP7P1-201ENST00000424004 391 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 RNF19BPX-201ENST00000426224 625 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
LIMK2P53671 RPS17P8-201ENST00000434525 335 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC093414.1-201ENST00000434712 514 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 MRPS33P4-201ENST00000434892 317 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK2P53671 Z99127.2-201ENST00000441426 334 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK2P53671 VN1R48P-201ENST00000448149 1036 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC009220.1-201ENST00000451614 275 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.79□□□□□ -1.64
LIMK2P53671 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK2P53671 OR52A4P-202ENST00000481634 799 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK2P53671 RFPL4AP5-201ENST00000514977 504 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 RNU6-760P-201ENST00000516078 97 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 RNA5SP464-201ENST00000516251 108 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK2P53671 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.79□□□□□ -1.64
LIMK2P53671 GSTP1P1-201ENST00000548078 319 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC012414.2-201ENST00000559474 187 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC093249.4-201ENST00000564755 259 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 AC233702.9-201ENST00000581528 203 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK2P53671 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LIMK2P53671 MIR6780A-201ENST00000615089 68 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 AC006840.1-201ENST00000623069 542 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 RBPJP2-201ENST00000618187 1444 ntBASIC4.79□□□□□ -1.64
LIMK2P53671 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK2P53671 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
LIMK2P53671 SAMMSON-226ENST00000642089 1582 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK2P53671 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 AC079741.1-201ENST00000321498 212 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 RNU4-7P-201ENST00000364758 141 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 MIR141-201ENST00000384975 95 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AL080315.1-201ENST00000406055 466 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 RPS16P5-201ENST00000406501 404 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 MTCYBP7-201ENST00000419540 1134 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.78□□□□□ -1.64
LIMK2P53671 AL590623.1-201ENST00000427864 105 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK2P53671 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK2P53671 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.78□□□□□ -1.64
LIMK2P53671 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 AC073264.2-201ENST00000448886 166 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 SLC25A18P1-201ENST00000449385 454 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LIMK2P53671 RPL23AP56-201ENST00000460778 453 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK2P53671 AC006967.1-201ENST00000467608 589 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK2P53671 AC108043.1-201ENST00000512696 574 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AC067904.2-201ENST00000517322 1283 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 MORF4L1P3-201ENST00000525966 950 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AC006518.1-201ENST00000541449 943 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LIMK2P53671 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.78□□□□□ -1.64
LIMK2P53671 CD24P2-201ENST00000565486 219 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.78□□□□□ -1.64
LIMK2P53671 MIR4675-201ENST00000577898 77 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.78□□□□□ -1.64
LIMK2P53671 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.78□□□□□ -1.64
LIMK2P53671 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK2P53671 BMS1P7-201ENST00000602440 1052 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AL512782.1-201ENST00000603093 364 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AC020910.3-201ENST00000603701 874 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AL023583.1-201ENST00000607518 1143 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AL135786.2-201ENST00000608422 615 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 641 ms