Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC007000.2-201ENST00000442564 487 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AL157827.1-201ENST00000447622 132 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK1P53667 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK1P53667 AC091912.1-201ENST00000511351 248 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 RN7SKP92-201ENST00000517266 244 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.08□□□□□ -1.6
LIMK1P53667 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LIMK1P53667 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 GCSHP4-201ENST00000538792 439 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AC122688.1-201ENST00000541494 223 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK1P53667 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.08□□□□□ -1.6
LIMK1P53667 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK1P53667 AC103792.1-201ENST00000603591 919 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK1P53667 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.08□□□□□ -1.6
LIMK1P53667 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 AC024341.1-201ENST00000526444 1552 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK1P53667 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 AC068446.1-201ENST00000556425 1549 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AC100871.1-201ENST00000507871 1456 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LIMK1P53667 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LIMK1P53667 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LIMK1P53667 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.07□□□□□ -1.6
LIMK1P53667 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LIMK1P53667 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LIMK1P53667 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LIMK1P53667 MIR298-201ENST00000401212 88 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 CTSL3P-202ENST00000412179 788 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.07□□□□□ -1.6
LIMK1P53667 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC092447.2-201ENST00000435487 669 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AL513321.1-201ENST00000441175 761 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.07□□□□□ -1.6
LIMK1P53667 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 PRPF38AP1-201ENST00000451976 933 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 NUTF2P7-201ENST00000453086 375 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 IFNWP4-201ENST00000453148 294 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 CABYRP1-201ENST00000465493 1045 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC116562.1-201ENST00000485355 781 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AC069304.1-201ENST00000491593 704 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC111000.3-201ENST00000508057 576 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC092709.1-201ENST00000521355 1045 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC090515.3-201ENST00000560431 315 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK1P53667 RPL21P136-201ENST00000605378 396 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AC242628.1-201ENST00000606810 391 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 AL445423.1-201ENST00000609941 536 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMK1P53667 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMK1P53667 AC068724.3-201ENST00000625906 87 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 IQCB2P-201ENST00000401788 1633 ntBASIC5.07□□□□□ -1.6
LIMK1P53667 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMK1P53667 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK1P53667 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 MFSD8-220ENST00000641243 1422 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 Z98755.1-201ENST00000407015 1384 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 AL450345.1-202ENST00000605741 3881 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK1P53667 RNU1-85P-201ENST00000364127 164 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.06□□□□□ -1.6
LIMK1P53667 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.06□□□□□ -1.6
LIMK1P53667 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK1P53667 RN7SKP114-201ENST00000410327 279 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AC069213.2-201ENST00000420238 366 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AC073464.3-201ENST00000422564 712 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 RPL17P35-201ENST00000432217 549 ntBASIC5.06□□□□□ -1.6
LIMK1P53667 AL590762.3-201ENST00000436372 640 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms