Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPL7P22-201ENST00000466005 733 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP98P52948 AL161912.2-201ENST00000565707 3007 ntBASIC5.37□□□□□ -1.55
NUP98P52948 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP98P52948 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP98P52948 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP98P52948 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP98P52948 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 TPT1P2-201ENST00000413105 503 ntBASIC5.36□□□□□ -1.55
NUP98P52948 AL590806.1-201ENST00000415818 853 ntBASIC5.36□□□□□ -1.55
NUP98P52948 AC044797.1-201ENST00000445744 679 ntBASIC5.36□□□□□ -1.55
NUP98P52948 RPL23AP81-201ENST00000455252 467 ntBASIC5.36□□□□□ -1.55
NUP98P52948 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP98P52948 OR7E10P-201ENST00000526420 991 ntBASIC5.36□□□□□ -1.55
NUP98P52948 MIR4429-201ENST00000580105 73 ntBASIC5.36□□□□□ -1.55
NUP98P52948 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP98P52948 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 CDRT1-208ENST00000630868 794 ntBASIC5.36□□□□□ -1.55
NUP98P52948 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP98P52948 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP98P52948 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NUP98P52948 AP001002.1-201ENST00000625148 1513 ntBASIC5.36□□□□□ -1.55
NUP98P52948 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NUP98P52948 MFSD8-242ENST00000641690 4199 ntBASIC5.36□□□□□ -1.55
NUP98P52948 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NUP98P52948 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP98P52948 AL137918.1-201ENST00000624542 1922 ntBASIC5.35□□□□□ -1.55
NUP98P52948 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP98P52948 OR11H4-201ENST00000315409 1082 ntBASIC5.35□□□□□ -1.55
NUP98P52948 RNA5SP130-201ENST00000364431 114 ntBASIC5.35□□□□□ -1.55
NUP98P52948 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP98P52948 TRAV35-201ENST00000390462 330 ntBASIC5.35□□□□□ -1.55
NUP98P52948 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP98P52948 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP98P52948 RPL23AP46-201ENST00000438548 490 ntBASIC5.35□□□□□ -1.55
NUP98P52948 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.35□□□□□ -1.55
NUP98P52948 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP98P52948 AC091153.1-201ENST00000466297 402 ntBASIC5.35□□□□□ -1.55
NUP98P52948 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.35□□□□□ -1.55
NUP98P52948 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.35□□□□□ -1.55
NUP98P52948 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP98P52948 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NUP98P52948 AC034229.5-201ENST00000624258 185 ntBASIC5.35□□□□□ -1.55
NUP98P52948 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NUP98P52948 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP98P52948 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP98P52948 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP98P52948 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP98P52948 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NUP98P52948 CASC19-204ENST00000641001 2055 ntBASIC5.35□□□□□ -1.55
NUP98P52948 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUP98P52948 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NUP98P52948 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
NUP98P52948 RPS3AP25-201ENST00000411660 793 ntBASIC5.34□□□□□ -1.55
NUP98P52948 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.34□□□□□ -1.55
NUP98P52948 ARAFP2-201ENST00000440565 559 ntBASIC5.34□□□□□ -1.55
NUP98P52948 AL591473.1-201ENST00000464297 313 ntBASIC5.34□□□□□ -1.55
NUP98P52948 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP98P52948 MIR2116-201ENST00000517221 80 ntBASIC5.34□□□□□ -1.55
NUP98P52948 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.34□□□□□ -1.55
NUP98P52948 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP98P52948 AC034105.4-201ENST00000568304 277 ntBASIC5.34□□□□□ -1.55
NUP98P52948 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP98P52948 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.34□□□□□ -1.55
NUP98P52948 AC012442.3-202ENST00000636742 206 ntBASIC5.34□□□□□ -1.55
NUP98P52948 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
NUP98P52948 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NUP98P52948 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP98P52948 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
NUP98P52948 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
NUP98P52948 RNA5SP171-201ENST00000391071 115 ntBASIC5.34□□□□□ -1.55
NUP98P52948 AC090013.1-201ENST00000485147 480 ntBASIC5.34□□□□□ -1.55
NUP98P52948 RPS4XP18-201ENST00000495480 763 ntBASIC5.34□□□□□ -1.55
NUP98P52948 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP98P52948 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP98P52948 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.34□□□□□ -1.55
NUP98P52948 MIR6875-201ENST00000617506 72 ntBASIC5.34□□□□□ -1.55
NUP98P52948 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
NUP98P52948 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.34□□□□□ -1.56
NUP98P52948 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP98P52948 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP98P52948 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 RNU1-20P-201ENST00000363314 162 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms