Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC015911.5-201ENST00000587076 451 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 AP001033.2-201ENST00000609701 1003 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC004241.3-201ENST00000611728 517 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 MIR378J-201ENST00000611988 109 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 RNU6-368P-201ENST00000620928 107 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 RNU6-538P-201ENST00000622329 107 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLCN3P51790 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CLCN3P51790 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLCN3P51790 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 ADAM5-202ENST00000399789 1942 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN3P51790 AL121950.1-201ENST00000624993 2077 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN3P51790 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN3P51790 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLCN3P51790 MAPK10-338ENST00000641647 3362 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC125336.1-201ENST00000508893 2827 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AL049697.2-201ENST00000403708 294 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.28□□□□□ -1.56
CLCN3P51790 ATG4AP1-201ENST00000416893 538 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 DPPA2P2-201ENST00000418220 897 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 UBE2D3P3-201ENST00000426992 425 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCN3P51790 MTCYBP12-201ENST00000440559 1134 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AL158053.1-201ENST00000441503 453 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC023512.1-201ENST00000444513 499 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN3P51790 AL356981.1-201ENST00000454879 684 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN3P51790 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
CLCN3P51790 AC012123.2-201ENST00000485809 248 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 MTCO2P9-201ENST00000503214 694 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN3P51790 OR51K1P-201ENST00000510214 950 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 BTG4P1-201ENST00000510421 183 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 RNA5SP230-201ENST00000517039 122 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 Y_RNA.719-201ENST00000517156 106 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 RAB9BP1-201ENST00000519581 626 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 MTND1P6-201ENST00000523621 946 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC109635.6-201ENST00000525487 1113 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCN3P51790 AC004923.2-201ENST00000529649 369 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 MTND5P21-201ENST00000531961 522 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCN3P51790 AC106785.3-201ENST00000564064 847 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 CBX3P2-202ENST00000583365 535 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 MIR4660-201ENST00000583549 74 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AF230666.2-201ENST00000602328 725 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC034236.3-201ENST00000605999 461 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC110792.4-201ENST00000609843 298 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 MIR6810-201ENST00000622701 70 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AC021106.3-201ENST00000623925 531 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN3P51790 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN3P51790 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN3P51790 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN3P51790 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN3P51790 AC083843.2-201ENST00000568248 6253 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCN3P51790 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CLCN3P51790 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CLCN3P51790 AC010266.2-201ENST00000564741 3255 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 AL132640.2-201ENST00000559968 1698 ntBASIC5.28□□□□□ -1.56
CLCN3P51790 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 SMG1P6-201ENST00000532337 2930 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCN3P51790 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.27□□□□□ -1.57
CLCN3P51790 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCN3P51790 AC092376.2-201ENST00000622621 4116 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCN3P51790 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCN3P51790 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCN3P51790 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCN3P51790 AC105031.1-201ENST00000518550 476 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 MTCO1P4-201ENST00000520516 1409 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCN3P51790 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCN3P51790 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.27□□□□□ -1.57
CLCN3P51790 AC005868.1-201ENST00000536421 331 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 AL359219.2-201ENST00000555184 348 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.27□□□□□ -1.57
CLCN3P51790 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCN3P51790 AC023158.1-201ENST00000561632 1025 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.27□□□□□ -1.57
CLCN3P51790 AC073091.2-201ENST00000603205 907 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms