Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 PROS2P-201ENST00000474651 1951 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HCFC1P51610 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
HCFC1P51610 RNU6-40P-201ENST00000384254 107 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 AL050305.1-201ENST00000399993 1230 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 RN7SKP27-201ENST00000410684 333 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 MTND4LP21-201ENST00000415303 295 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.18□□□□□ -1.74
HCFC1P51610 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 AL354692.1-201ENST00000423044 315 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.18□□□□□ -1.74
HCFC1P51610 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.18□□□□□ -1.74
HCFC1P51610 RNA5SP464-201ENST00000516251 108 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.18□□□□□ -1.74
HCFC1P51610 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 AC127024.5-201ENST00000580085 462 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.18□□□□□ -1.74
HCFC1P51610 AC022726.1-201ENST00000587475 207 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 AF129408.1-201ENST00000608767 431 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 TCP11X1-202ENST00000622971 1372 ntBASIC4.18□□□□□ -1.74
HCFC1P51610 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HCFC1P51610 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HCFC1P51610 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HCFC1P51610 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HCFC1P51610 NAMPTP1-201ENST00000440465 2514 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 OR4K17-201ENST00000315543 1032 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 HSPE1P16-201ENST00000426640 348 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 ZNF965P-201ENST00000432501 817 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.17□□□□□ -1.74
HCFC1P51610 YWHAZP2-201ENST00000440317 728 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AL353718.1-201ENST00000451028 517 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 RPL10P17-201ENST00000453852 316 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 AC025768.1-201ENST00000510057 267 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 TPT1P8-201ENST00000510120 555 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 RNU1-6P-201ENST00000516290 144 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 AC100784.1-201ENST00000522790 310 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.17□□□□□ -1.74
HCFC1P51610 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.17□□□□□ -1.74
HCFC1P51610 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.17□□□□□ -1.74
HCFC1P51610 AL731532.2-201ENST00000623542 1953 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AP000648.2-201ENST00000624182 404 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HCFC1P51610 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 SMG1P6-201ENST00000532337 2930 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HCFC1P51610 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 IGKV7-3-201ENST00000357453 298 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 SNORA27.3-201ENST00000364937 134 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 MIR129-1-201ENST00000384972 72 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 PTGES3P2-201ENST00000407942 482 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 MIR1193-201ENST00000408109 78 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 VN1R31P-201ENST00000417498 730 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AC104333.2-201ENST00000422630 192 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 RPS27AP12-201ENST00000429552 465 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 MTCO1P45-201ENST00000431457 267 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.17□□□□□ -1.74
HCFC1P51610 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.17□□□□□ -1.74
HCFC1P51610 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.17□□□□□ -1.74
HCFC1P51610 MTND2P28-201ENST00000457540 1044 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 RN7SL817P-201ENST00000480777 288 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 HMGB1P47-201ENST00000511281 589 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AC010374.2-201ENST00000512933 535 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.17□□□□□ -1.74
HCFC1P51610 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.17□□□□□ -1.74
HCFC1P51610 AC068831.4-201ENST00000556118 109 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 RN7SL652P-201ENST00000577769 300 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms