Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.95□□□□□ -1.78
CTLA4P16410 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CTLA4P16410 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTLA4P16410 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
CTLA4P16410 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CTLA4P16410 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTLA4P16410 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTLA4P16410 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CTLA4P16410 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTLA4P16410 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.94□□□□□ -1.78
CTLA4P16410 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
CTLA4P16410 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTLA4P16410 AC067945.1-201ENST00000342609 618 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 SNORD113.2-201ENST00000364166 89 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.94□□□□□ -1.78
CTLA4P16410 SNORA70F-201ENST00000384142 135 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 SNORA81-201ENST00000408493 178 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 RNA5SP146-201ENST00000410743 123 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 OR13Z1P-201ENST00000416141 834 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 UBTFL3-201ENST00000418934 1024 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.94□□□□□ -1.78
CTLA4P16410 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.94□□□□□ -1.78
CTLA4P16410 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.94□□□□□ -1.78
CTLA4P16410 NPM1P33-201ENST00000438918 872 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 RPSAP41-201ENST00000439695 860 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 HSPE1P22-201ENST00000456856 327 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 PSMC1P13-201ENST00000458195 985 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 RPL35AP28-201ENST00000459730 331 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.94□□□□□ -1.78
CTLA4P16410 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.94□□□□□ -1.78
CTLA4P16410 UBTFL6-201ENST00000477929 1024 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 NPM1P29-201ENST00000483112 803 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 AC008410.1-201ENST00000483777 339 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 RNA5SP497-201ENST00000516081 97 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 IGLV3-26-201ENST00000520756 302 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 RPL23AP97-201ENST00000568955 471 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.94□□□□□ -1.78
CTLA4P16410 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.94□□□□□ -1.78
CTLA4P16410 AC068790.7-201ENST00000602347 528 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 AC016252.1-201ENST00000609721 474 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 AL049539.1-201ENST00000611964 459 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 AL133243.1-201ENST00000614487 366 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 MIR6891-201ENST00000618788 93 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 AC006065.6-201ENST00000625201 545 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTLA4P16410 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTLA4P16410 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.94□□□□□ -1.78
CTLA4P16410 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTLA4P16410 AC021242.1-201ENST00000507315 2035 ntBASIC3.94□□□□□ -1.78
CTLA4P16410 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTLA4P16410 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.93□□□□□ -1.78
CTLA4P16410 BMS1P3-201ENST00000372011 932 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 RNU6-1263P-201ENST00000384601 106 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AL035419.1-201ENST00000397037 564 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 RN7SKP247-201ENST00000411094 308 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 RPS20P14-201ENST00000412545 360 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AC013470.3-201ENST00000420252 1194 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.93□□□□□ -1.78
CTLA4P16410 SKP1P3-201ENST00000429280 487 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 HMGB3P10-201ENST00000434734 572 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.93□□□□□ -1.78
CTLA4P16410 UBE2V1P3-201ENST00000439651 417 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.93□□□□□ -1.78
CTLA4P16410 RN7SL354P-201ENST00000469282 294 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 RPL21P6-201ENST00000479171 504 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AC111000.5-201ENST00000506559 1178 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 STMN1P2-201ENST00000508435 439 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.93□□□□□ -1.78
CTLA4P16410 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.93□□□□□ -1.78
CTLA4P16410 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.93□□□□□ -1.78
CTLA4P16410 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.93□□□□□ -1.78
CTLA4P16410 AC024940.4-201ENST00000605507 246 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CTLA4P16410 AP001784.1-201ENST00000624107 428 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AL049536.1-201ENST00000625043 744 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 AC055839.1-201ENST00000634467 498 ntBASIC3.93□□□□□ -1.78
CTLA4P16410 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTLA4P16410 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CTLA4P16410 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.93□□□□□ -1.78
CTLA4P16410 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CTLA4P16410 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CTLA4P16410 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTLA4P16410 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTLA4P16410 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTLA4P16410 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CTLA4P16410 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.92□□□□□ -1.78
CTLA4P16410 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CTLA4P16410 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms