Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 AL022393.1-201ENST00000625142 1677 ntBASIC5.08□□□□□ -1.6
PDGFRAP16234 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFRAP16234 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PDGFRAP16234 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PDGFRAP16234 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PDGFRAP16234 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 RNU6-532P-201ENST00000384318 107 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 UBE2V1P15-201ENST00000407776 448 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 EIF4HP2-201ENST00000424380 563 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 OR2AH1P-201ENST00000425717 928 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AL451139.1-201ENST00000434718 346 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC073648.4-201ENST00000442655 781 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 Z80107.2-201ENST00000445127 392 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC234781.3-201ENST00000452540 973 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFRAP16234 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 AC093663.2-201ENST00000484625 313 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFRAP16234 GAPDHP56-201ENST00000506031 988 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.07□□□□□ -1.6
PDGFRAP16234 RNA5SP303-201ENST00000516192 130 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 RNU6-1308P-201ENST00000516817 103 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.07□□□□□ -1.6
PDGFRAP16234 AP003168.1-201ENST00000530091 307 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFRAP16234 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFRAP16234 NOP56P3-201ENST00000549457 385 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC021483.2-201ENST00000567415 758 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC005242.1-201ENST00000585658 438 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFRAP16234 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFRAP16234 AC011453.2-201ENST00000603737 729 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 OR4H6P-202ENST00000603819 340 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC116651.1-201ENST00000609724 556 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC007497.1-201ENST00000610421 561 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 AC025016.1-201ENST00000616746 682 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 CR381572.2-201ENST00000624852 397 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PDGFRAP16234 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFRAP16234 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PDGFRAP16234 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFRAP16234 THAP12P5-201ENST00000405864 2275 ntBASIC5.07□□□□□ -1.6
PDGFRAP16234 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFRAP16234 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PDGFRAP16234 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFRAP16234 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 AC093535.2-201ENST00000624769 2326 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFRAP16234 ZNF652P1-201ENST00000442420 1309 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 AC008549.2-201ENST00000333482 706 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 MIR585-201ENST00000384887 94 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 RN7SKP222-201ENST00000410651 315 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 RBMY2KP-201ENST00000418221 992 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC073464.3-201ENST00000422564 712 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AL360081.1-201ENST00000428299 555 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.06□□□□□ -1.6
PDGFRAP16234 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFRAP16234 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 AC008072.1-201ENST00000434254 824 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 RPS17P8-201ENST00000434525 335 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC006466.1-201ENST00000438721 289 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFRAP16234 FHP1-201ENST00000442741 703 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFRAP16234 OR52J1P-201ENST00000450596 932 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC091685.2-201ENST00000454924 864 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 CABYRP1-201ENST00000465493 1045 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 RPL21P6-201ENST00000479171 504 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 UBA52P3-201ENST00000491303 382 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC105233.1-201ENST00000498840 781 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFRAP16234 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFRAP16234 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFRAP16234 CKS1BP1-201ENST00000555221 240 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC087477.6-201ENST00000559595 843 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms