Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CDH1P12830 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 AL359715.4-201ENST00000606629 1436 ntBASIC4.83□□□□□ -1.64
CDH1P12830 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CDH1P12830 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 RNA5SP507-201ENST00000363603 121 ntBASIC4.83□□□□□ -1.64
CDH1P12830 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH1P12830 RPL22P22-201ENST00000395439 379 ntBASIC4.83□□□□□ -1.64
CDH1P12830 ATP5HP3-201ENST00000396994 486 ntBASIC4.83□□□□□ -1.64
CDH1P12830 LRRC37BP1-201ENST00000398851 714 ntBASIC4.83□□□□□ -1.64
CDH1P12830 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH1P12830 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 RN7SKP213-201ENST00000410746 298 ntBASIC4.83□□□□□ -1.64
CDH1P12830 VN1R51P-201ENST00000411675 945 ntBASIC4.83□□□□□ -1.64
CDH1P12830 CBX1P3-201ENST00000413296 527 ntBASIC4.83□□□□□ -1.64
CDH1P12830 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH1P12830 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH1P12830 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 VN1R42P-201ENST00000424651 344 ntBASIC4.83□□□□□ -1.64
CDH1P12830 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH1P12830 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 BX119904.1-201ENST00000432026 348 ntBASIC4.83□□□□□ -1.64
CDH1P12830 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH1P12830 AL450023.3-201ENST00000440592 271 ntBASIC4.83□□□□□ -1.64
CDH1P12830 RRM2P4-201ENST00000441721 562 ntBASIC4.83□□□□□ -1.64
CDH1P12830 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 RPL7P33-201ENST00000444159 742 ntBASIC4.83□□□□□ -1.64
CDH1P12830 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH1P12830 MTND6P5-201ENST00000448266 512 ntBASIC4.83□□□□□ -1.64
CDH1P12830 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 AC109462.1-201ENST00000491087 368 ntBASIC4.83□□□□□ -1.64
CDH1P12830 SUMO1P1-201ENST00000497904 306 ntBASIC4.83□□□□□ -1.64
CDH1P12830 UBE2V1P12-201ENST00000503954 474 ntBASIC4.83□□□□□ -1.64
CDH1P12830 AC096571.1-202ENST00000506634 735 ntBASIC4.83□□□□□ -1.64
CDH1P12830 AC112518.2-201ENST00000508565 425 ntBASIC4.83□□□□□ -1.64
CDH1P12830 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 ENPP7P9-201ENST00000514456 627 ntBASIC4.83□□□□□ -1.64
CDH1P12830 RFPL4AP3-201ENST00000515267 345 ntBASIC4.83□□□□□ -1.64
CDH1P12830 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 RNA5SP43-201ENST00000516559 110 ntBASIC4.83□□□□□ -1.64
CDH1P12830 RN7SKP147-201ENST00000517154 244 ntBASIC4.83□□□□□ -1.64
CDH1P12830 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 AC013701.1-201ENST00000522657 465 ntBASIC4.83□□□□□ -1.64
CDH1P12830 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 CIR1P1-201ENST00000524055 1133 ntBASIC4.83□□□□□ -1.64
CDH1P12830 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH1P12830 OR7E18P-201ENST00000592589 702 ntBASIC4.83□□□□□ -1.64
CDH1P12830 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH1P12830 CLIC4P2-201ENST00000601934 717 ntBASIC4.83□□□□□ -1.64
CDH1P12830 BMS1P7-201ENST00000602440 1052 ntBASIC4.83□□□□□ -1.64
CDH1P12830 AC013244.3-201ENST00000605614 388 ntBASIC4.83□□□□□ -1.64
CDH1P12830 AL353600.1-201ENST00000608148 251 ntBASIC4.83□□□□□ -1.64
CDH1P12830 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH1P12830 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH1P12830 HSPA8P18-201ENST00000439846 1928 ntBASIC4.83□□□□□ -1.64
CDH1P12830 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH1P12830 AP001273.1-201ENST00000624493 3152 ntBASIC4.83□□□□□ -1.64
CDH1P12830 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CDH1P12830 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH1P12830 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDH1P12830 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CDH1P12830 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH1P12830 RN7SKP125-201ENST00000410481 302 ntBASIC4.82□□□□□ -1.64
CDH1P12830 MTCO2P8-201ENST00000412213 658 ntBASIC4.82□□□□□ -1.64
CDH1P12830 GJA6P-201ENST00000415117 1042 ntBASIC4.82□□□□□ -1.64
CDH1P12830 BMS1P13-201ENST00000417301 885 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.82□□□□□ -1.64
CDH1P12830 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH1P12830 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH1P12830 AC092647.3-201ENST00000443044 633 ntBASIC4.82□□□□□ -1.64
CDH1P12830 MTCYBP21-201ENST00000443300 1113 ntBASIC4.82□□□□□ -1.64
CDH1P12830 OR7E125P-201ENST00000443450 846 ntBASIC4.82□□□□□ -1.64
CDH1P12830 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 AC073850.1-201ENST00000449243 255 ntBASIC4.82□□□□□ -1.64
CDH1P12830 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDH1P12830 CYCSP34-201ENST00000458172 304 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC092691.2-201ENST00000461787 803 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC008379.1-201ENST00000463655 464 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC112206.1-201ENST00000468416 477 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH1P12830 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH1P12830 RN7SL244P-201ENST00000493405 297 ntBASIC4.82□□□□□ -1.64
CDH1P12830 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH1P12830 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH1P12830 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms