Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL11A1P12107 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.95□□□□□ -1.62
COL11A1P12107 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 RPS27AP13-201ENST00000498403 237 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 MTCO1P49-201ENST00000523429 802 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 OR5BC1P-201ENST00000529327 739 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL11A1P12107 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.95□□□□□ -1.62
COL11A1P12107 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL11A1P12107 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.95□□□□□ -1.62
COL11A1P12107 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 AC068870.3-201ENST00000625077 2536 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL11A1P12107 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL11A1P12107 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COL11A1P12107 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL11A1P12107 RNU1-83P-201ENST00000363426 164 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 RNA5SP171-201ENST00000391071 115 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 RAB9AP4-201ENST00000415230 609 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 RPL36AP36-201ENST00000418616 301 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 HMGN2P27-201ENST00000427352 270 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 RPL35AP15-201ENST00000468042 339 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL11A1P12107 KCTD9P2-201ENST00000512203 1013 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 AC099522.1-202ENST00000514718 367 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 AP003730.1-201ENST00000524605 285 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 RNU4-89P-201ENST00000607443 133 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 ZYXP1-201ENST00000617638 118 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL11A1P12107 AL133243.3-201ENST00000617415 3004 ntBASIC4.94□□□□□ -1.62
COL11A1P12107 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.94□□□□□ -1.62
COL11A1P12107 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.93□□□□□ -1.62
COL11A1P12107 AC025750.1-201ENST00000399891 379 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.93□□□□□ -1.62
COL11A1P12107 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 BMS1P19-201ENST00000433925 393 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 GTF3AP5-201ENST00000442645 697 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 AL512326.1-201ENST00000443050 721 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.93□□□□□ -1.62
COL11A1P12107 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.93□□□□□ -1.62
COL11A1P12107 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 AC079587.1-201ENST00000603846 277 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.93□□□□□ -1.62
COL11A1P12107 FAM27D1-201ENST00000612308 341 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 AL161637.1-201ENST00000622380 412 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 AP005435.3-201ENST00000531260 3198 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AL022393.1-201ENST00000625142 1677 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
COL11A1P12107 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
COL11A1P12107 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.93□□□□□ -1.62
COL11A1P12107 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AL672167.1-203ENST00000641299 2975 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AC005261.2-201ENST00000593427 4258 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AC000374.1-201ENST00000434698 1745 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.93□□□□□ -1.62
COL11A1P12107 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL11A1P12107 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.93□□□□□ -1.62
COL11A1P12107 AL080315.1-201ENST00000406055 466 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AL451062.2-201ENST00000427515 271 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 SERPINA7P1-201ENST00000443077 631 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 MRPL48P1-201ENST00000445390 636 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.93□□□□□ -1.62
COL11A1P12107 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 AC138832.1-201ENST00000522871 556 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL11A1P12107 AC006130.2-201ENST00000586202 326 ntBASIC4.93□□□□□ -1.62
COL11A1P12107 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.93□□□□□ -1.62
COL11A1P12107 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.93□□□□□ -1.62
COL11A1P12107 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.92□□□□□ -1.62
COL11A1P12107 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.92□□□□□ -1.62
COL11A1P12107 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
COL11A1P12107 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL11A1P12107 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL11A1P12107 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL11A1P12107 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL11A1P12107 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL11A1P12107 AC097461.1-201ENST00000568928 2821 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms