Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.38□□□□□ -1.55
MMP3P08254 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.38□□□□□ -1.55
MMP3P08254 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 SS18L2P2-201ENST00000583960 235 ntBASIC5.38□□□□□ -1.55
MMP3P08254 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.38□□□□□ -1.55
MMP3P08254 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 AL442639.1-201ENST00000625030 1899 ntBASIC5.38□□□□□ -1.55
MMP3P08254 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 AC007382.1-201ENST00000624376 2618 ntBASIC5.38□□□□□ -1.55
MMP3P08254 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MMP3P08254 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MMP3P08254 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 SMG1P6-201ENST00000532337 2930 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AC093671.1-201ENST00000624981 2929 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.37□□□□□ -1.55
MMP3P08254 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
MMP3P08254 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.37□□□□□ -1.55
MMP3P08254 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 MIR16-2-201ENST00000362117 81 ntBASIC5.37□□□□□ -1.55
MMP3P08254 SNORD113.2-201ENST00000364166 89 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AC068538.1-201ENST00000376856 336 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 RN7SKP16-201ENST00000410180 299 ntBASIC5.37□□□□□ -1.55
MMP3P08254 ATG4AP1-201ENST00000416893 538 ntBASIC5.37□□□□□ -1.55
MMP3P08254 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.37□□□□□ -1.55
MMP3P08254 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 RPS27AP6-201ENST00000427962 448 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.37□□□□□ -1.55
MMP3P08254 MTCYBP21-201ENST00000443300 1113 ntBASIC5.37□□□□□ -1.55
MMP3P08254 OR52E3P-201ENST00000452083 936 ntBASIC5.37□□□□□ -1.55
MMP3P08254 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.37□□□□□ -1.55
MMP3P08254 RPL32P14-201ENST00000463196 378 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AC026979.1-201ENST00000492525 396 ntBASIC5.37□□□□□ -1.55
MMP3P08254 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.37□□□□□ -1.55
MMP3P08254 NIFKP7-201ENST00000503365 834 ntBASIC5.37□□□□□ -1.55
MMP3P08254 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.37□□□□□ -1.55
MMP3P08254 AP003355.1-201ENST00000518956 587 ntBASIC5.37□□□□□ -1.55
MMP3P08254 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.37□□□□□ -1.55
MMP3P08254 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.37□□□□□ -1.55
MMP3P08254 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.37□□□□□ -1.55
MMP3P08254 AC009643.1-201ENST00000532030 391 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.37□□□□□ -1.55
MMP3P08254 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.37□□□□□ -1.55
MMP3P08254 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.37□□□□□ -1.55
MMP3P08254 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.37□□□□□ -1.55
MMP3P08254 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.37□□□□□ -1.55
MMP3P08254 AC093765.1-201ENST00000603758 881 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AC068880.4-201ENST00000623082 495 ntBASIC5.37□□□□□ -1.55
MMP3P08254 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MMP3P08254 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 FRG1DP-201ENST00000635586 771 ntBASIC5.37□□□□□ -1.55
MMP3P08254 AC099654.9-201ENST00000637055 678 ntBASIC5.37□□□□□ -1.55
MMP3P08254 TMEM30CP-203ENST00000637814 1035 ntBASIC5.37□□□□□ -1.55
MMP3P08254 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
MMP3P08254 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.37□□□□□ -1.55
MMP3P08254 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MMP3P08254 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MMP3P08254 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MMP3P08254 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
MMP3P08254 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MMP3P08254 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 TLK1P1-201ENST00000456760 2440 ntBASIC5.36□□□□□ -1.55
MMP3P08254 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.36□□□□□ -1.55
MMP3P08254 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.36□□□□□ -1.55
MMP3P08254 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MMP3P08254 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 MIR129-1-201ENST00000384972 72 ntBASIC5.36□□□□□ -1.55
MMP3P08254 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MMP3P08254 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms