Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL121878.1-201ENST00000418638 859 ntBASIC5.3□□□□□ -1.56
RB1P06400 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 CYCSP11-201ENST00000436426 315 ntBASIC5.3□□□□□ -1.56
RB1P06400 AL591363.1-201ENST00000450091 483 ntBASIC5.3□□□□□ -1.56
RB1P06400 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.3□□□□□ -1.56
RB1P06400 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.3□□□□□ -1.56
RB1P06400 RPS5P7-201ENST00000456664 608 ntBASIC5.3□□□□□ -1.56
RB1P06400 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.3□□□□□ -1.56
RB1P06400 AC078857.1-201ENST00000469870 667 ntBASIC5.3□□□□□ -1.56
RB1P06400 AC007537.2-201ENST00000472093 511 ntBASIC5.3□□□□□ -1.56
RB1P06400 SYT14P1-201ENST00000481459 721 ntBASIC5.3□□□□□ -1.56
RB1P06400 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.3□□□□□ -1.56
RB1P06400 AC107398.1-201ENST00000486904 505 ntBASIC5.3□□□□□ -1.56
RB1P06400 IMPA1P1-201ENST00000510718 842 ntBASIC5.3□□□□□ -1.56
RB1P06400 AC138832.1-201ENST00000522871 556 ntBASIC5.3□□□□□ -1.56
RB1P06400 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.3□□□□□ -1.56
RB1P06400 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.3□□□□□ -1.56
RB1P06400 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 TMF1P1-201ENST00000576058 373 ntBASIC5.3□□□□□ -1.56
RB1P06400 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.3□□□□□ -1.56
RB1P06400 AC020910.2-201ENST00000603635 610 ntBASIC5.3□□□□□ -1.56
RB1P06400 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.3□□□□□ -1.56
RB1P06400 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.3□□□□□ -1.56
RB1P06400 AL356218.2-201ENST00000605264 187 ntBASIC5.3□□□□□ -1.56
RB1P06400 AC092653.1-201ENST00000608509 531 ntBASIC5.3□□□□□ -1.56
RB1P06400 AL445423.1-201ENST00000609941 536 ntBASIC5.3□□□□□ -1.56
RB1P06400 AC097460.3-201ENST00000623099 442 ntBASIC5.3□□□□□ -1.56
RB1P06400 AC138965.3-201ENST00000623875 498 ntBASIC5.3□□□□□ -1.56
RB1P06400 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 FRG1DP-201ENST00000635586 771 ntBASIC5.3□□□□□ -1.56
RB1P06400 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.29□□□□□ -1.56
RB1P06400 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 NCLP2-201ENST00000416078 1462 ntBASIC5.29□□□□□ -1.56
RB1P06400 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RB1P06400 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 RN7SKP227-201ENST00000364445 330 ntBASIC5.29□□□□□ -1.56
RB1P06400 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RB1P06400 AC233289.1-201ENST00000403700 508 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC004690.1-201ENST00000418216 328 ntBASIC5.29□□□□□ -1.56
RB1P06400 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.29□□□□□ -1.56
RB1P06400 BX119904.1-201ENST00000432026 348 ntBASIC5.29□□□□□ -1.56
RB1P06400 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.29□□□□□ -1.56
RB1P06400 MTND2P40-201ENST00000436718 841 ntBASIC5.29□□□□□ -1.56
RB1P06400 AP000936.3-201ENST00000438127 255 ntBASIC5.29□□□□□ -1.56
RB1P06400 AL035551.1-201ENST00000446931 348 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC004980.3-201ENST00000447046 365 ntBASIC5.29□□□□□ -1.56
RB1P06400 EIF2S2P2-201ENST00000447161 982 ntBASIC5.29□□□□□ -1.56
RB1P06400 BX842559.2-201ENST00000451418 605 ntBASIC5.29□□□□□ -1.56
RB1P06400 RPL23AP56-201ENST00000460778 453 ntBASIC5.29□□□□□ -1.56
RB1P06400 ABCC13-202ENST00000463099 3842 ntBASIC5.29□□□□□ -1.56
RB1P06400 RPL12P20-201ENST00000475538 479 ntBASIC5.29□□□□□ -1.56
RB1P06400 RN7SL441P-201ENST00000492388 296 ntBASIC5.29□□□□□ -1.56
RB1P06400 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.29□□□□□ -1.56
RB1P06400 AC098976.1-201ENST00000513014 541 ntBASIC5.29□□□□□ -1.56
RB1P06400 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.29□□□□□ -1.56
RB1P06400 RN7SKP122-201ENST00000515923 296 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.29□□□□□ -1.56
RB1P06400 BNIP3P5-201ENST00000562290 498 ntBASIC5.29□□□□□ -1.56
RB1P06400 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.29□□□□□ -1.56
RB1P06400 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.29□□□□□ -1.56
RB1P06400 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.29□□□□□ -1.56
RB1P06400 AC010503.3-201ENST00000594355 540 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC124856.1-201ENST00000600819 896 ntBASIC5.29□□□□□ -1.56
RB1P06400 AL020997.2-201ENST00000602607 184 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC005776.1-201ENST00000603164 290 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC005014.3-201ENST00000605985 190 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC145207.9-201ENST00000623802 325 ntBASIC5.29□□□□□ -1.56
RB1P06400 AC103798.2-201ENST00000624292 632 ntBASIC5.29□□□□□ -1.56
RB1P06400 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.29□□□□□ -1.56
RB1P06400 STX3-208ENST00000641815 3236 ntBASIC5.29□□□□□ -1.56
RB1P06400 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RB1P06400 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RB1P06400 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RB1P06400 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.28□□□□□ -1.56
RB1P06400 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RB1P06400 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.28□□□□□ -1.56
RB1P06400 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.28□□□□□ -1.56
RB1P06400 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RB1P06400 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.28□□□□□ -1.56
RB1P06400 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms