Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PRPF19P1-201ENST00000584766 898 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 AC005000.2-201ENST00000605468 310 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.14□□□□□ -1.75
SPTA1P02549 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SPTA1P02549 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SPTA1P02549 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SPTA1P02549 RNA5SP241-201ENST00000391326 114 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 AC108032.1-201ENST00000416706 207 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 QRSL1P2-201ENST00000418582 964 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 AC046176.1-201ENST00000435260 1170 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.14□□□□□ -1.75
SPTA1P02549 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 BNIP3P35-201ENST00000604530 490 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 SNORA51-201ENST00000606420 132 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 AC083899.1-201ENST00000454465 3819 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.13□□□□□ -1.75
SPTA1P02549 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 RNU1-83P-201ENST00000363426 164 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 MIR34B-201ENST00000385076 84 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 RPL21P65-201ENST00000406094 466 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.13□□□□□ -1.75
SPTA1P02549 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.13□□□□□ -1.75
SPTA1P02549 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.13□□□□□ -1.75
SPTA1P02549 AL136231.1-201ENST00000429407 730 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.13□□□□□ -1.75
SPTA1P02549 AC027667.1-201ENST00000545814 304 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.13□□□□□ -1.75
SPTA1P02549 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.13□□□□□ -1.75
SPTA1P02549 AC116553.2-201ENST00000564203 463 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC4.13□□□□□ -1.75
SPTA1P02549 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.13□□□□□ -1.75
SPTA1P02549 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.13□□□□□ -1.75
SPTA1P02549 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.13□□□□□ -1.75
SPTA1P02549 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.13□□□□□ -1.75
SPTA1P02549 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.13□□□□□ -1.75
SPTA1P02549 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 AC016745.2-201ENST00000608834 3443 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 AC092681.1-201ENST00000297369 291 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 RNU6ATAC-201ENST00000408749 126 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 AC093578.1-201ENST00000415219 368 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.13□□□□□ -1.75
SPTA1P02549 UBE2DNL-203ENST00000474922 222 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 CDH12P2-201ENST00000504393 298 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 AC026403.1-201ENST00000518938 295 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.13□□□□□ -1.75
SPTA1P02549 OR7E10P-201ENST00000526420 991 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 TVP23BP1-201ENST00000557500 617 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.13□□□□□ -1.75
SPTA1P02549 AC096553.1-201ENST00000605169 829 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 TMEM30CP-203ENST00000637814 1035 ntBASIC4.13□□□□□ -1.75
SPTA1P02549 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SPTA1P02549 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SPTA1P02549 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SPTA1P02549 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SPTA1P02549 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SPTA1P02549 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SPTA1P02549 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SPTA1P02549 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SPTA1P02549 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SPTA1P02549 AC007068.1-201ENST00000396690 844 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 AC096664.2-201ENST00000411843 406 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.12□□□□□ -1.75
SPTA1P02549 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.12□□□□□ -1.75
SPTA1P02549 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.12□□□□□ -1.75
SPTA1P02549 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.12□□□□□ -1.75
SPTA1P02549 FTH1P16-201ENST00000435241 552 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.12□□□□□ -1.75
SPTA1P02549 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.12□□□□□ -1.75
SPTA1P02549 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 RN7SL703P-201ENST00000578485 302 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms