Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC135352.1-201ENST00000506173 1418 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 AP001002.1-201ENST00000625148 1513 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN9O95484 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 SNORD65-201ENST00000391079 73 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 Y_RNA.625-201ENST00000411256 107 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 CEACAMP8-201ENST00000413902 580 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 AC140479.3-201ENST00000418944 1126 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.48□□□□□ -1.69
CLDN9O95484 Z85994.2-201ENST00000434327 452 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 TMX2P1-201ENST00000436507 708 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN9O95484 AC016831.4-201ENST00000438302 307 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 RPL7L1P1-201ENST00000448259 785 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 RPL23AP65-201ENST00000475608 468 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 STRADBP1-201ENST00000478954 1281 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 RPL21P6-201ENST00000479171 504 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 RN7SKP276-201ENST00000516242 268 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 snoU109.6-201ENST00000516831 118 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN9O95484 SOX5P1-201ENST00000524155 1127 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 AP000676.2-201ENST00000529711 301 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 CYCSP28-201ENST00000534284 321 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN9O95484 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN9O95484 RPL21P7-201ENST00000557463 483 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 MIR3667-201ENST00000581025 74 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN9O95484 AC008966.2-201ENST00000606157 453 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 CASC19-222ENST00000641321 1173 ntBASIC4.48□□□□□ -1.69
CLDN9O95484 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN9O95484 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN9O95484 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN9O95484 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 RNU4-23P-201ENST00000362839 140 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLDN9O95484 MIR585-201ENST00000384887 94 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 MIR195-201ENST00000385194 87 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 RN7SKP100-201ENST00000411258 284 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN9O95484 BX510359.2-201ENST00000417920 305 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 AC004074.1-201ENST00000421810 1063 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 AL450263.2-201ENST00000439400 589 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 CASP3P1-201ENST00000446037 609 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 RPL31P44-201ENST00000447680 377 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AC108463.1-201ENST00000450258 347 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 AC243772.1-201ENST00000451620 410 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 RPS6P2-201ENST00000454208 705 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 RN7SL860P-201ENST00000473738 223 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AC108022.1-201ENST00000493466 478 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 NDUFB5P1-201ENST00000508134 564 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AC117525.1-201ENST00000515228 503 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 RNU2-30P-201ENST00000516209 141 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN9O95484 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 AL110118.1-201ENST00000553543 400 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN9O95484 AC091178.1-203ENST00000584586 279 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 AL031320.1-201ENST00000604177 357 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN9O95484 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN9O95484 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN9O95484 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN9O95484 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CLDN9O95484 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
CLDN9O95484 MAPK10-349ENST00000641767 3661 ntBASIC4.47□□□□□ -1.69
CLDN9O95484 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLDN9O95484 AL391684.1-202ENST00000641293 1636 ntBASIC4.46□□□□□ -1.69
CLDN9O95484 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLDN9O95484 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.46□□□□□ -1.69
CLDN9O95484 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.46□□□□□ -1.69
CLDN9O95484 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
CLDN9O95484 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN9O95484 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms