Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL590084.1-201ENST00000407885 387 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 RNA5SP498-201ENST00000411342 120 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AL357752.1-201ENST00000412817 349 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 MTND4P22-201ENST00000413116 1169 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 OR4K6P-201ENST00000416478 897 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AK4P4-201ENST00000419465 646 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 BX119904.4-201ENST00000424402 301 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS4BO75351 AL365396.1-201ENST00000430854 671 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS4BO75351 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS4BO75351 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS4BO75351 RSL24D1P3-201ENST00000449255 495 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 TPTE2P5-203ENST00000458118 728 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS4BO75351 RN7SL30P-201ENST00000488416 306 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 AC006499.3-201ENST00000506077 748 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS4BO75351 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 AC087373.1-201ENST00000524920 491 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 MTND2P26-201ENST00000528255 1029 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS4BO75351 IGBP1P1-201ENST00000554337 1009 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS4BO75351 SETP1-201ENST00000556014 845 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS4BO75351 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 SS18L2P2-201ENST00000583960 235 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AC010487.1-201ENST00000594408 1172 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AC110760.3-201ENST00000598794 467 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AC125494.3-201ENST00000602759 455 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AL358072.1-201ENST00000604156 575 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 MIR6748-201ENST00000610433 71 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS4BO75351 AL158163.2-201ENST00000619110 700 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 AC067852.7-201ENST00000623270 535 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS4BO75351 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS4BO75351 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS4BO75351 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS4BO75351 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS4BO75351 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS4BO75351 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS4BO75351 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS4BO75351 AC109780.1-201ENST00000451768 1344 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.46□□□□□ -1.54
VPS4BO75351 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS4BO75351 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS4BO75351 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS4BO75351 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS4BO75351 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS4BO75351 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS4BO75351 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS4BO75351 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VPS4BO75351 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS4BO75351 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS4BO75351 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS4BO75351 CCT8P1-201ENST00000413611 1657 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 NSRP1P1-201ENST00000444067 1693 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS4BO75351 RNU6-666P-201ENST00000363499 107 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS4BO75351 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS4BO75351 QRSL1P2-201ENST00000418582 964 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 AL390023.1-201ENST00000428836 262 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS4BO75351 AL772161.1-201ENST00000439130 476 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 RPL5P25-201ENST00000441148 775 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS4BO75351 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS4BO75351 AL133217.1-201ENST00000450980 425 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 AC093166.4-201ENST00000457867 318 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 snoZ278.1-201ENST00000517059 112 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS4BO75351 EIF4A2P5-201ENST00000529914 499 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS4BO75351 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS4BO75351 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS4BO75351 AL049872.1-201ENST00000556323 322 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS4BO75351 CYP2C60P-201ENST00000566088 139 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 MTCO1P40-201ENST00000574371 625 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 MIR4311-201ENST00000580794 100 ntBASIC5.45□□□□□ -1.54
VPS4BO75351 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS4BO75351 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms