Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM38O00635 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM38O00635 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM38O00635 OR52B5P-201ENST00000435337 951 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 MTND4P6-201ENST00000438297 472 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 AC093166.2-201ENST00000455969 1017 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 TPTE2P5-203ENST00000458118 728 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM38O00635 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM38O00635 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM38O00635 AC104108.1-201ENST00000509930 412 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 RN7SKP99-201ENST00000517028 307 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 IGLV3-24-201ENST00000517477 197 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM38O00635 AC079064.1-201ENST00000528365 362 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 HMGN2P6-201ENST00000551091 273 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 VN1R84P-201ENST00000593697 235 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM38O00635 Z95327.3-201ENST00000610385 572 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AC139769.3-201ENST00000618383 175 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AP002967.1-201ENST00000624203 539 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 OR52B5P-202ENST00000641118 1110 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AC139713.2-210ENST00000641741 992 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 AL031595.2-201ENST00000624215 19071 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AC006042.3-201ENST00000454684 1469 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM38O00635 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM38O00635 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 MTND4P5-201ENST00000435821 1374 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 RNA5SP335-201ENST00000363817 110 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM38O00635 GNG5P5-201ENST00000420444 220 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AL133325.1-201ENST00000421090 382 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 RPP40P1-201ENST00000426762 456 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM38O00635 MTND5P25-201ENST00000430499 799 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 TMEM183AP1-205ENST00000432739 290 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 MTND1P34-201ENST00000438556 671 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 ATP5C1P1-201ENST00000441945 895 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 FAR2P1-206ENST00000449736 709 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 RPL7P61-201ENST00000451721 751 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AC008565.1-201ENST00000509046 885 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 RN7SKP265-201ENST00000516448 223 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 RN7SKP287-201ENST00000516546 266 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 RNU6-1028P-201ENST00000517164 93 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM38O00635 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM38O00635 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM38O00635 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM38O00635 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 EIF1P6-201ENST00000600054 334 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM38O00635 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 AC245008.1-201ENST00000608123 476 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AL121612.2-201ENST00000612261 482 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AL139407.1-201ENST00000613826 1175 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AC008121.2-201ENST00000614647 523 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AC090510.2-201ENST00000617465 629 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AC138965.3-201ENST00000623875 498 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AC093536.2-201ENST00000565257 1406 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM38O00635 AC005005.4-201ENST00000623789 16698 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TRIM38O00635 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms