Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ACTR3P2-201ENST00000439585 1257 ntBASIC4.81□□□□□ -1.64
RTCAO00442 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 TXNP5-201ENST00000441043 315 ntBASIC4.81□□□□□ -1.64
RTCAO00442 EEF1B2P5-201ENST00000444820 548 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.81□□□□□ -1.64
RTCAO00442 RPL37P3-201ENST00000456825 293 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC018638.3-201ENST00000461273 132 ntBASIC4.81□□□□□ -1.64
RTCAO00442 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCAO00442 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCAO00442 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.81□□□□□ -1.64
RTCAO00442 PRELID3BP7-201ENST00000503606 469 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.81□□□□□ -1.64
RTCAO00442 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.81□□□□□ -1.64
RTCAO00442 AC138832.1-201ENST00000522871 556 ntBASIC4.81□□□□□ -1.64
RTCAO00442 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 OR4U1P-201ENST00000554958 912 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AL359219.2-201ENST00000555184 348 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC006349.1-201ENST00000555526 235 ntBASIC4.81□□□□□ -1.64
RTCAO00442 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.81□□□□□ -1.64
RTCAO00442 MIR4458-201ENST00000578872 75 ntBASIC4.81□□□□□ -1.64
RTCAO00442 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.81□□□□□ -1.64
RTCAO00442 AC040174.2-201ENST00000602701 465 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC105254.2-201ENST00000603636 436 ntBASIC4.81□□□□□ -1.64
RTCAO00442 TAS2R6P-201ENST00000605022 826 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC018695.5-201ENST00000605872 315 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC004948.1-201ENST00000609858 672 ntBASIC4.81□□□□□ -1.64
RTCAO00442 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 AL023881.1-201ENST00000621088 301 ntBASIC4.81□□□□□ -1.64
RTCAO00442 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
RTCAO00442 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCAO00442 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCAO00442 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 AC100871.1-201ENST00000507871 1456 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.8□□□□□ -1.64
RTCAO00442 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.8□□□□□ -1.64
RTCAO00442 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTCAO00442 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 CIR1P2-201ENST00000514821 1342 ntBASIC4.8□□□□□ -1.64
RTCAO00442 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTCAO00442 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTCAO00442 U8.4-201ENST00000363626 134 ntBASIC4.8□□□□□ -1.64
RTCAO00442 RNA5SP455-201ENST00000365190 119 ntBASIC4.8□□□□□ -1.64
RTCAO00442 SNORA70.10-201ENST00000384515 134 ntBASIC4.8□□□□□ -1.64
RTCAO00442 CCNB2P1-201ENST00000399411 1150 ntBASIC4.8□□□□□ -1.64
RTCAO00442 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.8□□□□□ -1.64
RTCAO00442 MIR1178-201ENST00000408396 91 ntBASIC4.8□□□□□ -1.64
RTCAO00442 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTCAO00442 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 MTND2P21-201ENST00000436242 1042 ntBASIC4.8□□□□□ -1.64
RTCAO00442 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 YWHAZP2-201ENST00000440317 728 ntBASIC4.8□□□□□ -1.64
RTCAO00442 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RTCAO00442 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.8□□□□□ -1.64
RTCAO00442 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 TCEA1P1-201ENST00000449716 880 ntBASIC4.8□□□□□ -1.64
RTCAO00442 IGHV5-78-201ENST00000450948 295 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AC110749.1-201ENST00000462007 357 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AC097484.1-201ENST00000471148 389 ntBASIC4.8□□□□□ -1.64
RTCAO00442 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 HMGN2P25-201ENST00000486956 268 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AC113430.1-201ENST00000506872 718 ntBASIC4.8□□□□□ -1.64
RTCAO00442 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 AC012339.2-201ENST00000523996 453 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AC022882.1-201ENST00000532142 501 ntBASIC4.8□□□□□ -1.64
RTCAO00442 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RTCAO00442 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 POLR2KP1-201ENST00000553226 168 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.8□□□□□ -1.64
RTCAO00442 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 NDUFB4P11-201ENST00000560510 395 ntBASIC4.8□□□□□ -1.64
RTCAO00442 LINC00557-201ENST00000563184 1279 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AC115085.1-201ENST00000588924 229 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.8□□□□□ -1.64
RTCAO00442 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 AL627230.1-201ENST00000613077 211 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AL591926.8-201ENST00000616876 211 ntBASIC4.8□□□□□ -1.64
RTCAO00442 AL356490.1-201ENST00000623079 479 ntBASIC4.8□□□□□ -1.64
RTCAO00442 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTCAO00442 AC104623.2-202ENST00000623477 4002 ntBASIC4.8□□□□□ -1.64
RTCAO00442 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.8□□□□□ -1.64
RTCAO00442 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCAO00442 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.8□□□□□ -1.64
RTCAO00442 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCAO00442 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCAO00442 RARSP1-201ENST00000542842 1418 ntBASIC4.8□□□□□ -1.64
RTCAO00442 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms