Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL391358.1-201ENST00000605342 190 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC073137.1-201ENST00000605636 634 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC133644.2-201ENST00000608142 540 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 RMST_9.1-201ENST00000619945 193 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC015908.5-201ENST00000623289 343 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL356121.2-201ENST00000624715 780 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RNA5SP52-201ENST00000362448 134 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RN7SKP115-201ENST00000363177 317 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RNU6-178P-201ENST00000384631 104 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RN7SKP267-201ENST00000410381 285 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RN7SKP100-201ENST00000411258 284 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 GAPDHP49-201ENST00000421421 961 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RPL7P57-201ENST00000423238 740 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 IPMKP1-201ENST00000425988 855 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 SKP1P3-201ENST00000429280 487 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 OR2B7P-201ENST00000429302 934 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 H2AFZP5-201ENST00000446960 382 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RPL7P61-201ENST00000451721 751 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC079168.2-201ENST00000453977 416 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC091685.2-201ENST00000454924 864 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 RPS3AP41-201ENST00000462701 778 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC090142.1-201ENST00000465776 462 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 CCDC75P1-201ENST00000469247 791 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AGGF1P3-201ENST00000493675 1213 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AP002981.1-201ENST00000517692 975 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC090281.1-201ENST00000523019 276 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AP001880.2-201ENST00000538233 448 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 HMGB3P26-201ENST00000560051 582 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC008536.1-201ENST00000602872 669 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AL031320.1-201ENST00000604177 357 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 COX6CP4-201ENST00000605798 228 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 MIR4727-201ENST00000622232 55 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 HSPA8P17-201ENST00000427029 1382 ntBASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DRB4X5D2U9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AC068254.2-201ENST00000623938 3577 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 MIR708-201ENST00000390708 88 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 Z98745.1-201ENST00000402553 494 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AC016831.4-201ENST00000438302 307 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AL357520.1-201ENST00000441557 453 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 RPS3AP53-201ENST00000454716 778 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 ATP5G1P3-201ENST00000463301 410 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AC012158.1-204ENST00000483430 465 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 PPBPP1-201ENST00000510807 373 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AC006499.6-201ENST00000511169 607 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 RN7SKP276-201ENST00000516242 268 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 MTCYBP19-201ENST00000517463 1124 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 SOX5P1-201ENST00000524155 1127 ntBASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DRB4X5D2U9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms