Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 NAMPTP1-201ENST00000440465 2514 ntBASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 INTS6P1-201ENST00000504674 2530 ntBASIC5.15□□□□□ -1.58
RAI2Q9Y5P3 SNURFL-201ENST00000309296 343 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 RNU6-354P-201ENST00000383862 107 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 RNU6-398P-201ENST00000384143 109 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 RNU6-610P-201ENST00000384264 107 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL035079.1-201ENST00000405210 287 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC096533.1-201ENST00000411645 353 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 COX5BP7-201ENST00000414780 274 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 RRM2P4-201ENST00000441721 562 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC012512.1-201ENST00000446594 718 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 KNOP1P3-201ENST00000446933 426 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL049874.2-201ENST00000492636 288 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC021146.5-201ENST00000503544 545 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 SUMO2P5-201ENST00000506790 245 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 RN7SKP260-201ENST00000516907 149 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 MIR4284-201ENST00000578924 81 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC009974.1-201ENST00000608881 455 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC004908.3-201ENST00000610248 625 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL161616.1-201ENST00000611867 286 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AC091046.3-201ENST00000631455 1574 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 SEPT7P7-201ENST00000420492 1301 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
RAI2Q9Y5P3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 RNA5SP479-201ENST00000364858 117 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 OR13C3-201ENST00000374781 1108 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 AC234772.1-201ENST00000377927 937 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 RNU6-468P-201ENST00000384003 109 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 RNA5SP87-201ENST00000384155 118 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 RPL21P67-201ENST00000402896 478 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 HMGB3P19-201ENST00000403971 560 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 SNORA79B-201ENST00000410557 148 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 DDX39BP1-205ENST00000422507 192 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 AL160175.1-201ENST00000428124 247 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 HMGB3P5-201ENST00000428894 612 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 RPS3AP6-201ENST00000484430 795 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 HMGN2P25-201ENST00000486956 268 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 NIFKP7-201ENST00000503365 834 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 AC069306.1-201ENST00000507006 843 ntBASIC5.14□□□□□ -1.59
RAI2Q9Y5P3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms