Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 RPL9P21-201ENST00000392269 505 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL356133.1-201ENST00000444762 372 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 TMSB4XP3-201ENST00000445144 114 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL161722.1-201ENST00000446972 1032 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AC105399.1-202ENST00000447303 205 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 RPL7AP71-201ENST00000451120 739 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL034399.1-201ENST00000451535 380 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AC017015.1-201ENST00000477387 286 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 OR4D12P-201ENST00000509361 911 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 RNU6-1003P-201ENST00000517099 105 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 RPL7P20-201ENST00000520308 745 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 RBMS2P1-201ENST00000525031 1226 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 IMMP1LP2-201ENST00000552954 492 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 SIGLEC31P-201ENST00000594237 551 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL670379.11-201ENST00000604059 253 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL670379.10-201ENST00000604330 253 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL670379.12-201ENST00000605291 253 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 AL670379.9-201ENST00000605428 253 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 MIR6883-201ENST00000614952 78 ntBASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.16□□□□□ -0.94
TRIM35Q9UPQ4 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 BTK-202ENST00000372880 2248 ntTSL 2 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 RNU6-472P-201ENST00000384299 107 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 RN7SKP62-201ENST00000384539 329 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 MIR514A2-201ENST00000385131 88 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 MIR514A3-201ENST00000385132 88 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 Y_RNA.645-201ENST00000391229 102 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AL590762.1-201ENST00000391782 432 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC013404.1-201ENST00000413068 249 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 RPL18AP14-201ENST00000417685 526 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC023347.2-201ENST00000433994 462 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 FTH1P16-201ENST00000435241 552 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC098831.1-201ENST00000440661 216 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 RPL26P30-201ENST00000453533 435 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 RNU7-157P-201ENST00000459600 66 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC083806.1-201ENST00000468934 316 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC128716.1-201ENST00000475129 166 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 Y_RNA.700-201ENST00000516806 100 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 OR5D2P-201ENST00000524390 911 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC099489.2-201ENST00000574976 260 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 AC005753.1-201ENST00000623837 618 ntBASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TRIM35Q9UPQ4 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 COL6A4P1-202ENST00000487147 4317 ntBASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 RN7SKP23-201ENST00000625159 4301 ntBASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 USP13-203ENST00000496897 2747 ntTSL 2 BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 AC093775.1-201ENST00000624154 1868 ntBASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 AC119674.1-202ENST00000641333 1860 ntBASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC9.15□□□□□ -0.95
TRIM35Q9UPQ4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms