Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC110775.1-201ENST00000513721 462 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 RNU2-30P-201ENST00000516209 141 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 RNA5SP34-201ENST00000516887 130 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 MTCYBP19-201ENST00000517463 1124 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AL110118.1-201ENST00000553543 400 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 SULT1C2P2-201ENST00000562517 294 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AL121834.1-201ENST00000572284 509 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC011487.3-201ENST00000593607 453 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AL138721.1-201ENST00000616756 179 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AL669942.2-201ENST00000620352 697 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 VPS35P1-201ENST00000563400 1518 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC139769.1-204ENST00000472297 1931 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 KARSP3-201ENST00000571212 1504 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC019155.1-201ENST00000382242 574 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AL078604.1-201ENST00000404609 466 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC062016.2-201ENST00000420950 676 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 RAD23BP1-201ENST00000421404 1227 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AL590609.2-201ENST00000421430 368 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 OR1H1P-201ENST00000448731 937 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC092905.1-201ENST00000467527 949 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 RPSAP50-201ENST00000481955 852 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC007016.1-201ENST00000512110 244 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 snoU109.6-201ENST00000516831 118 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 OR5AZ1P-201ENST00000527448 943 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC244517.3-201ENST00000616254 1235 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 U3.53-201ENST00000628922 216 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 AC018529.3-201ENST00000624212 2254 ntBASIC4.28□□□□□ -1.72
VAPAQ9P0L0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VAPAQ9P0L0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 MIR708-201ENST00000390708 88 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 RNA5SP105-201ENST00000391123 113 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 Z98745.1-201ENST00000402553 494 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AL121834.1-202ENST00000404494 277 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AL136131.1-201ENST00000406079 803 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 ATG4AP1-201ENST00000416893 538 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 IPMKP1-201ENST00000425988 855 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms