Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC012075.1-201ENST00000436549 580 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 PPIAP20-201ENST00000449839 135 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC015908.1-201ENST00000478739 476 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 FABP5P6-201ENST00000510588 409 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 HMGB1P47-201ENST00000511281 589 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC067904.2-201ENST00000517322 1283 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 IGLV3-26-201ENST00000520756 302 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC209154.1-201ENST00000582156 337 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 BNIP3P19-201ENST00000605397 577 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AL121932.1-201ENST00000605542 214 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AL450270.1-201ENST00000606160 391 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC012213.4-201ENST00000606457 354 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 OR10AB1P-202ENST00000641219 1686 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC068254.2-201ENST00000623938 3577 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 SNORA70-201ENST00000384436 135 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 TBCAP2-201ENST00000416175 326 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 UBE2V1P6-201ENST00000430840 422 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 ARL5AP3-201ENST00000439327 386 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC009127.1-201ENST00000467090 155 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 RN7SL222P-201ENST00000476452 299 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC025445.1-201ENST00000502728 300 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 COX6B1P5-201ENST00000509843 249 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 RNU6-319P-201ENST00000516025 108 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 RNU6-889P-201ENST00000517189 103 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 CR383656.14-201ENST00000551951 406 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AL133247.2-201ENST00000603236 482 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 MIR6862-1-201ENST00000613016 70 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 MIR6862-2-201ENST00000614755 70 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 MIR6729-201ENST00000618194 65 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 AP002967.1-201ENST00000624203 539 ntBASIC4.56□□□□□ -1.68
NDE1Q9NXR1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NDE1Q9NXR1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AL355852.1-201ENST00000454081 1771 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 RNA5SP284-201ENST00000384547 118 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms