Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 NMNAT1P2-201ENST00000435192 860 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC092647.3-201ENST00000443044 633 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 RNU6-599P-201ENST00000459383 107 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 RNU6-1193P-201ENST00000459461 107 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC093890.1-201ENST00000502554 540 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 OR5M14P-201ENST00000506803 618 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC034244.2-201ENST00000514668 858 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 RNA5SP43-201ENST00000516559 110 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC104115.2-201ENST00000523026 687 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 SOX5P1-201ENST00000524155 1127 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 GLRXP2-201ENST00000555594 321 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC093591.2-201ENST00000565254 3843 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 MIR4691-201ENST00000583764 85 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 BMS1P7-201ENST00000602440 1052 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC068620.3-201ENST00000602749 560 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC096947.1-201ENST00000603233 470 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC005377.1-201ENST00000605126 456 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC026741.1-201ENST00000605892 482 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 MIR8084-201ENST00000614105 89 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 BNIP3P41-202ENST00000616656 861 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 RNU6-368P-201ENST00000620928 107 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 RNU6-538P-201ENST00000622329 107 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC105105.5-201ENST00000622635 1294 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC018445.2-201ENST00000622987 260 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AP002799.1-201ENST00000623552 423 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC090772.4-201ENST00000623599 362 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 AC107068.1-201ENST00000563286 4218 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 CASC19-261ENST00000641853 1638 ntBASIC5.07□□□□□ -1.6
PCDH9Q9HC56 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDH9Q9HC56 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 RNU4-44P-201ENST00000363050 141 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 RNU4-4P-201ENST00000364588 130 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 RNU6-1000P-201ENST00000391066 106 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 U3.35-201ENST00000408405 208 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 SETP15-201ENST00000412724 337 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 RGS17P1-201ENST00000423358 553 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 RHOT1P3-201ENST00000436571 331 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 RNFT1P2-201ENST00000443064 757 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AL445433.1-201ENST00000457507 257 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AP001804.2-201ENST00000533932 910 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC087763.1-201ENST00000603391 286 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC013244.1-201ENST00000604279 193 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC005021.1-201ENST00000608730 355 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 EIF3FP1-201ENST00000613970 806 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AC099654.8-201ENST00000637757 681 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 CASC19-281ENST00000642118 1554 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 SALL4P2-201ENST00000423288 2910 ntBASIC5.06□□□□□ -1.6
PCDH9Q9HC56 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH9Q9HC56 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH9Q9HC56 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms