Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 GAPDHP49-201ENST00000421421 961 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AC234779.1-201ENST00000425910 285 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 MRPL48P1-201ENST00000445390 636 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 RPL23AP43-201ENST00000446445 471 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AC002553.2-201ENST00000453217 340 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 RPL10P17-201ENST00000453852 316 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 RNA5SP303-201ENST00000516192 130 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AL390334.1-201ENST00000556395 450 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AL590392.1-201ENST00000604960 446 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 AC006338.2-201ENST00000616864 791 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NXF3Q9H4D5 CASC19-255ENST00000641733 1385 ntBASIC4.9□□□□□ -1.63
NXF3Q9H4D5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 SNRPFP1-201ENST00000414761 252 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 PTP4A1P1-201ENST00000420539 515 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 RSL24D1P6-201ENST00000426934 401 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AL121578.1-201ENST00000428051 892 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC109327.1-201ENST00000471666 403 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC010476.1-201ENST00000519111 851 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC009950.2-201ENST00000636548 183 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 LINC00622-201ENST00000562811 1570 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC026951.1-201ENST00000559530 2459 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AL731566.1-201ENST00000620490 1937 ntBASIC4.89□□□□□ -1.63
NXF3Q9H4D5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NXF3Q9H4D5 AP000542.2-201ENST00000623199 6179 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 RN7SKP74-201ENST00000362849 309 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 RNU1-83P-201ENST00000363426 164 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 RAD23BP1-201ENST00000421404 1227 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 OR2AH1P-201ENST00000425717 928 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 NPM1P26-201ENST00000426339 738 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 HSPE1P16-201ENST00000426640 348 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 NPM1P33-201ENST00000438918 872 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 RPS4XP12-201ENST00000461747 709 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 OR9N1P-201ENST00000491296 333 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 OR10D4P-201ENST00000525892 951 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 PARP1P2-201ENST00000556806 195 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 ATP5J2P6-201ENST00000565203 266 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 AC069366.1-201ENST00000583159 838 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 MIR3936-201ENST00000584304 110 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 AL713998.2-201ENST00000604538 1198 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 AC012557.1-201ENST00000607115 611 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 MTND5P23-201ENST00000430812 1655 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 AL022393.1-201ENST00000625142 1677 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NXF3Q9H4D5 SALL4P2-201ENST00000423288 2910 ntBASIC4.88□□□□□ -1.63
NXF3Q9H4D5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms