Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 OR4F13P-202ENST00000560066 2054 ntBASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AMBRA1Q9C0C7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AF287957.1-201ENST00000607368 1595 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 RNU1-150P-201ENST00000362491 162 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 RNU6-623P-201ENST00000363143 105 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MIR525-201ENST00000384978 85 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AL138880.1-201ENST00000405824 642 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 PTP4A1P1-201ENST00000420539 515 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 OR5AW1P-201ENST00000426334 1006 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 CNOT7P1-201ENST00000429006 852 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 KCTD10P1-201ENST00000434203 625 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 FTH1P16-201ENST00000435241 552 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 TUBB4BP6-201ENST00000437576 479 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 RPS27AP8-201ENST00000452665 445 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AL122020.1-201ENST00000472287 459 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 LINC00888-204ENST00000487386 421 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC006499.4-201ENST00000510947 694 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC074255.1-201ENST00000511259 501 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 SNORD46.2-201ENST00000516021 102 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 Y_RNA.667-201ENST00000516212 107 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AP000648.1-201ENST00000529682 397 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC124293.1-201ENST00000530034 493 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 YWHABP2-201ENST00000540201 713 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC079600.1-201ENST00000550326 297 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC006530.1-201ENST00000555980 571 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC016180.1-201ENST00000567945 403 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC002400.1-201ENST00000569310 726 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MIR3912-201ENST00000577566 105 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 DPRXP4-201ENST00000578053 568 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MIR4776-2-201ENST00000580204 80 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 COX6CP7-201ENST00000597056 208 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC119751.7-201ENST00000600494 245 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AL031281.1-201ENST00000604049 488 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC106791.2-201ENST00000604680 391 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC099676.1-201ENST00000608886 657 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AL136295.6-201ENST00000610486 658 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC090246.1-201ENST00000616499 426 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MFSD8-245ENST00000641743 948 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 MTND4P5-201ENST00000435821 1374 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AL138820.1-201ENST00000617901 5305 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 SGO1P2-201ENST00000429458 1589 ntBASIC5.25□□□□□ -1.57
AMBRA1Q9C0C7 AC027088.4-201ENST00000611559 1947 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms