Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC104695.2-201ENST00000605056 775 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 OR1N1-202ENST00000619659 939 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AP000346.3-201ENST00000622821 210 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AP002833.3-201ENST00000625075 2265 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 ZNF734P-201ENST00000419494 1534 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC032011.1-201ENST00000611703 1549 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC131649.2-201ENST00000624925 4439 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AL359922.2-201ENST00000581788 3017 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 SNORA69-201ENST00000383895 132 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 RNU1-39P-201ENST00000383897 165 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 MIR142-201ENST00000384835 87 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 RPL23AP29-201ENST00000397284 453 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 RNU2-8P-201ENST00000410727 190 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 HMGB3P2-201ENST00000411913 584 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC083862.1-201ENST00000427378 1242 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 RAB9AP5-201ENST00000437794 597 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 SUMO2P3-201ENST00000438311 288 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AL049734.2-201ENST00000441066 616 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 RAB9AP2-201ENST00000443911 597 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC004453.1-201ENST00000487895 408 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC104564.1-201ENST00000493028 407 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 SUMO2P7-201ENST00000511179 285 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 RPL7L1P13-201ENST00000511702 739 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 RNU6-445P-201ENST00000516949 107 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 SNORA25.17-201ENST00000517184 124 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AP003396.4-201ENST00000527574 265 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 PCNAP4-201ENST00000532690 730 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 ZNF322P1-201ENST00000568013 1209 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 MRPS5P4-201ENST00000592830 325 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC115286.1-201ENST00000604298 434 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC112187.2-201ENST00000604345 283 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AC004696.1-201ENST00000614345 607 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AP000473.2-201ENST00000602659 1537 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 CCDC162P-202ENST00000368966 6751 ntBASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL25A1Q9BXS0 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL25A1Q9BXS0 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms