Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC138938.1-201ENST00000515431 782 ntBASIC5.56□□□□□ -1.52
SMOQ99835 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.56□□□□□ -1.52
SMOQ99835 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.56□□□□□ -1.52
SMOQ99835 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMOQ99835 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.56□□□□□ -1.52
SMOQ99835 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.56□□□□□ -1.52
SMOQ99835 HAUS8P1-201ENST00000549005 542 ntBASIC5.56□□□□□ -1.52
SMOQ99835 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.56□□□□□ -1.52
SMOQ99835 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.56□□□□□ -1.52
SMOQ99835 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SMOQ99835 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.56□□□□□ -1.52
SMOQ99835 AC095055.1-201ENST00000603472 1113 ntBASIC5.56□□□□□ -1.52
SMOQ99835 AL360219.1-201ENST00000610230 366 ntBASIC5.56□□□□□ -1.52
SMOQ99835 AC018445.2-201ENST00000622987 260 ntBASIC5.56□□□□□ -1.52
SMOQ99835 AC024023.1-201ENST00000624530 922 ntBASIC5.56□□□□□ -1.52
SMOQ99835 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SMOQ99835 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMOQ99835 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMOQ99835 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.56□□□□□ -1.52
SMOQ99835 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SMOQ99835 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMOQ99835 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.56□□□□□ -1.52
SMOQ99835 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SMOQ99835 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.56□□□□□ -1.52
SMOQ99835 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC111188.2-201ENST00000529697 1387 ntBASIC5.55□□□□□ -1.52
SMOQ99835 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.55□□□□□ -1.52
SMOQ99835 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SMOQ99835 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SMOQ99835 SNORD113-6-201ENST00000363345 75 ntBASIC5.55□□□□□ -1.52
SMOQ99835 U8.4-201ENST00000363626 134 ntBASIC5.55□□□□□ -1.52
SMOQ99835 RNU6-353P-201ENST00000364266 108 ntBASIC5.55□□□□□ -1.52
SMOQ99835 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.55□□□□□ -1.52
SMOQ99835 RNU6-83P-201ENST00000384568 112 ntBASIC5.55□□□□□ -1.52
SMOQ99835 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 TAF13P2-201ENST00000416876 286 ntBASIC5.55□□□□□ -1.52
SMOQ99835 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.55□□□□□ -1.52
SMOQ99835 MTND2P40-201ENST00000436718 841 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AL008629.1-201ENST00000438615 184 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.55□□□□□ -1.52
SMOQ99835 EXTL2P1-201ENST00000446218 416 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AL035407.2-201ENST00000454090 378 ntBASIC5.55□□□□□ -1.52
SMOQ99835 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC107015.1-201ENST00000466902 747 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC009127.1-201ENST00000467090 155 ntBASIC5.55□□□□□ -1.52
SMOQ99835 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 RPS18P6-201ENST00000476880 458 ntBASIC5.55□□□□□ -1.52
SMOQ99835 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 SNRPCP2-201ENST00000504370 475 ntBASIC5.55□□□□□ -1.52
SMOQ99835 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.55□□□□□ -1.52
SMOQ99835 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.55□□□□□ -1.52
SMOQ99835 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC027308.1-201ENST00000517993 110 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.55□□□□□ -1.52
SMOQ99835 AP000926.4-201ENST00000527351 454 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 OR10G5P-201ENST00000532733 358 ntBASIC5.55□□□□□ -1.52
SMOQ99835 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.55□□□□□ -1.52
SMOQ99835 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.55□□□□□ -1.52
SMOQ99835 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.55□□□□□ -1.52
SMOQ99835 AC005951.1-201ENST00000576706 485 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC110760.3-201ENST00000598794 467 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC008814.1-201ENST00000603797 406 ntBASIC5.55□□□□□ -1.52
SMOQ99835 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.55□□□□□ -1.52
SMOQ99835 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.55□□□□□ -1.52
SMOQ99835 AC015660.5-201ENST00000623238 564 ntBASIC5.55□□□□□ -1.52
SMOQ99835 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SMOQ99835 SAMMSON-227ENST00000642114 1199 ntBASIC5.55□□□□□ -1.52
SMOQ99835 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
SMOQ99835 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMOQ99835 AC097063.1-201ENST00000426714 1797 ntBASIC5.55□□□□□ -1.52
SMOQ99835 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.55□□□□□ -1.52
SMOQ99835 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SMOQ99835 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SMOQ99835 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.54□□□□□ -1.52
SMOQ99835 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 SNORA17.1-201ENST00000362945 126 ntBASIC5.54□□□□□ -1.52
SMOQ99835 RNU1-87P-201ENST00000363727 170 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms