Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP88Q99567 MCTS2P-201ENST00000394552 546 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP88Q99567 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP88Q99567 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP88Q99567 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP88Q99567 ELOCP13-201ENST00000443934 329 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 EIF2S2P2-201ENST00000447161 982 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 AL645937.3-201ENST00000453647 936 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 AC091685.2-201ENST00000454924 864 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 AL133244.1-201ENST00000456007 258 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 IGBP1P4-201ENST00000503202 879 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP88Q99567 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP88Q99567 AC002456.2-201ENST00000509356 380 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 AC104108.1-201ENST00000509930 412 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 HMGN1P9-201ENST00000515212 298 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP88Q99567 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP88Q99567 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP88Q99567 NDUFS5P6-201ENST00000529136 295 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 EIF4A2P5-201ENST00000529914 499 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP88Q99567 AC087897.1-201ENST00000550134 156 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP88Q99567 MIR4700-201ENST00000578311 74 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP88Q99567 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP88Q99567 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP88Q99567 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP88Q99567 AC098935.2-201ENST00000604222 466 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 AC009597.2-201ENST00000604659 592 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP88Q99567 FRG1HP-204ENST00000617940 757 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP88Q99567 AC112198.2-201ENST00000426589 6996 ntBASIC6.1□□□□□ -1.43
NUP88Q99567 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP88Q99567 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
NUP88Q99567 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP88Q99567 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NUP88Q99567 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 RBPJP2-201ENST00000618187 1444 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NUP88Q99567 RNA5SP123-201ENST00000363244 119 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP88Q99567 MTND4P3-201ENST00000417829 541 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 VN1R54P-201ENST00000435210 1049 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 RHOT1P3-201ENST00000436571 331 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 TPTE2P3-201ENST00000441562 1189 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP88Q99567 AL592437.1-201ENST00000443781 492 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP88Q99567 DNAJB5P1-201ENST00000454004 806 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC108161.1-201ENST00000461060 402 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP88Q99567 RPL21P131-201ENST00000497298 483 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP88Q99567 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP88Q99567 RNU6-311P-201ENST00000516224 102 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.09□□□□□ -1.43
NUP88Q99567 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.09□□□□□ -1.43
NUP88Q99567 AC006518.2-201ENST00000542513 940 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AP000619.2-201ENST00000546014 969 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP88Q99567 AC027104.1-201ENST00000563702 681 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 MIR7853-201ENST00000584820 132 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 AC234772.3-201ENST00000602277 528 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC106052.1-201ENST00000608029 497 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC116651.1-201ENST00000609724 556 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC009159.2-201ENST00000617603 606 ntBASIC6.09□□□□□ -1.43
NUP88Q99567 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
NUP88Q99567 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP88Q99567 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
NUP88Q99567 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NUP88Q99567 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.09□□□□□ -1.44
NUP88Q99567 MAPK10-328ENST00000641553 4009 ntBASIC6.09□□□□□ -1.44
NUP88Q99567 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP88Q99567 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUP88Q99567 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms