Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 RNU1-20P-201ENST00000363314 162 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC083799.1-201ENST00000366451 910 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 MIR3065-201ENST00000390137 79 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC004690.1-201ENST00000418216 328 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 DNAJC19P7-201ENST00000428811 344 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 NIP7P2-201ENST00000485801 544 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 CYCSP28-201ENST00000534284 321 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 GSTP1P1-201ENST00000548078 319 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC005034.4-201ENST00000603612 899 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC079587.1-201ENST00000603846 277 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC239803.2-201ENST00000610161 430 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AL353684.1-201ENST00000622677 1120 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC132825.8-201ENST00000640783 297 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 MTCO1P22-201ENST00000604619 1360 ntBASIC6.39□□□□□ -1.39
SIN3AQ96ST3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SIN3AQ96ST3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 OR51H2P-202ENST00000641424 3046 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 OR5P1P-201ENST00000299512 925 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 RNA5SP307-201ENST00000362863 116 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 MTND3P20-201ENST00000407663 186 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AC009480.2-201ENST00000422916 432 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 RPS29P17-201ENST00000430795 166 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 BTBD7P2-201ENST00000441962 620 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 HMGN2P47-201ENST00000559378 272 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 ATP5J2P6-201ENST00000565203 266 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 RPL23AP97-201ENST00000568955 471 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AL021368.1-201ENST00000607490 540 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 SNORD91B-202ENST00000608459 222 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AC097505.1-201ENST00000610199 565 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AC020763.5-201ENST00000623298 430 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AC007546.2-201ENST00000623996 360 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 TCP1P3-201ENST00000414406 1498 ntBASIC6.38□□□□□ -1.39
SIN3AQ96ST3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SIN3AQ96ST3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 CHIAP3-201ENST00000423668 1133 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 H2AFZP6-201ENST00000444403 394 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 TPT1P13-201ENST00000449760 499 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 RPL23AP24-201ENST00000458203 385 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 RPL7P22-201ENST00000466005 733 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 RN7SL817P-201ENST00000480777 288 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 RNA5SP497-201ENST00000516081 97 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AC021483.2-201ENST00000567415 758 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AL356218.2-201ENST00000605264 187 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AC019193.2-201ENST00000610012 634 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 MIR6758-201ENST00000620653 63 ntBASIC6.37□□□□□ -1.39
SIN3AQ96ST3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SIN3AQ96ST3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms