Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.82
CSMD1Q96PZ7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.65□□□□□ -1.82
CSMD1Q96PZ7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CSMD1Q96PZ7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 RN7SKP235-201ENST00000410662 305 ntBASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 AC105233.3-201ENST00000531125 744 ntBASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CSMD1Q96PZ7 MIR331-201ENST00000362302 94 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 MIR128-1-201ENST00000384921 82 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AL592156.1-201ENST00000508758 304 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 FTH1P9-201ENST00000513251 355 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 FKBP1BP1-201ENST00000553366 325 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 GTF2IP8-201ENST00000560687 584 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AC010608.2-201ENST00000624830 470 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 AL033543.1-201ENST00000623440 13454 ntBASIC3.64□□□□□ -1.83
CSMD1Q96PZ7 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 RNU1-14P-201ENST00000362759 152 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AL450992.3-201ENST00000413192 568 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC104306.1-201ENST00000449702 371 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 EIF4BP1-201ENST00000554881 351 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC027455.1-201ENST00000574104 594 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 BPIFA4P-203ENST00000603168 689 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 CASC19-261ENST00000641853 1638 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 OR4F13P-201ENST00000428478 931 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 ISCUP1-201ENST00000454451 448 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 RNU6-352P-201ENST00000516908 107 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 Y_RNA.719-201ENST00000517156 106 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 PRELID3BP3-201ENST00000584963 545 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 ELOCP35-201ENST00000604289 336 ntBASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CSMD1Q96PZ7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms