Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC104687.1-201ENST00000485829 412 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC108471.1-201ENST00000513977 287 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 Y_RNA.717-201ENST00000517106 92 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC104417.1-201ENST00000523974 751 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 NDUFS5P6-201ENST00000529136 295 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 MIR4330-201ENST00000579077 105 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 ELOCP28-201ENST00000590044 317 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC125494.3-201ENST00000602759 455 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC106052.1-201ENST00000608029 497 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC013468.1-201ENST00000608680 598 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC006946.3-201ENST00000609791 756 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC004232.3-201ENST00000622977 525 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC024595.1-201ENST00000623088 387 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AP003497.2-201ENST00000624220 967 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 U6.107-201ENST00000637108 79 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC232271.1-201ENST00000602455 2715 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 GVINP1-202ENST00000531871 7271 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 U3.3-201ENST00000362986 216 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AL592310.1-201ENST00000414330 671 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 COX6B1P1-201ENST00000415962 213 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 EI24P4-201ENST00000423683 1078 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 YWHAEP5-201ENST00000431545 765 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AL035246.1-201ENST00000433554 1255 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 PTGES3P1-201ENST00000439531 483 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 TPTE2P3-201ENST00000441562 1189 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC111193.1-201ENST00000504097 155 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC020699.1-201ENST00000505161 445 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 ST13P12-201ENST00000508958 1094 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 RN7SKP260-201ENST00000516907 149 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC026407.1-201ENST00000518369 204 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC136777.2-201ENST00000522979 358 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AP002812.4-201ENST00000532139 286 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 EDDM3DP-201ENST00000554692 434 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 NPM1P47-201ENST00000560843 856 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 ZNF92P3-201ENST00000596594 954 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC098935.2-201ENST00000604222 466 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AL450336.1-201ENST00000605180 586 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC009974.1-201ENST00000608881 455 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 PART1_2.1-201ENST00000612397 250 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC087385.3-201ENST00000620477 187 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AL356863.1-201ENST00000623378 1080 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms