Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 OR6C69P-201ENST00000394268 893 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RPS3AP54-201ENST00000435535 734 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RPL21P126-201ENST00000470049 478 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC098799.3-201ENST00000506095 438 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 RN7SKP46-201ENST00000515942 234 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 BPIFA4P-203ENST00000603168 689 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 AL353726.1-201ENST00000614041 1000 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 ZNF137P-201ENST00000456718 1920 ntBASIC4.64□□□□□ -1.67
SHROOM3Q8TF72 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AP001284.1-201ENST00000528393 2118 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 RPS20P14-201ENST00000412545 360 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 RPS4XP18-201ENST00000495480 763 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AC138938.1-201ENST00000515431 782 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 OR4A2P-201ENST00000527276 913 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AC090017.1-201ENST00000548612 1779 ntBASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHROOM3Q8TF72 AL022322.2-201ENST00000624072 20397 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 SNORA31.9-201ENST00000516429 84 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 NPM1P6-201ENST00000521088 871 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AC073137.1-201ENST00000605636 634 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AL592182.3-201ENST00000642132 3304 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AL590762.2-201ENST00000395798 571 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AC097374.1-203ENST00000400783 485 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 EEF1A1P1-201ENST00000447052 739 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AP005901.4-201ENST00000577336 569 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 MIR4444-1-201ENST00000581696 74 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 MIR4444-2-201ENST00000584390 74 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 AC097505.1-201ENST00000610199 565 ntBASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.62□□□□□ -1.67
SHROOM3Q8TF72 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 RN7SKP224-201ENST00000364140 325 ntBASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms