Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC008627.1-201ENST00000517511 1704 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 RPS3AP23-201ENST00000401762 784 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC007390.1-201ENST00000415722 356 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AL121878.1-201ENST00000418638 859 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC104843.2-201ENST00000427666 297 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 OR4F13P-201ENST00000428478 931 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 PPIAP10-201ENST00000438675 458 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 USP9YP15-201ENST00000442391 422 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 PMCHL2-203ENST00000457791 237 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 OR52A4P-201ENST00000472867 958 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 RPL7P24-201ENST00000493052 752 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC104109.1-201ENST00000498563 436 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 NPM1P27-201ENST00000502784 830 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC021678.1-201ENST00000505195 936 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 CR383656.6-201ENST00000550518 394 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC068305.2-201ENST00000550567 1205 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 NPM1P5-201ENST00000557228 838 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 RPS3AP23-202ENST00000574601 686 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AL009028.1-201ENST00000604895 802 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AL050343.2-201ENST00000607338 280 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AL365204.3-201ENST00000612448 685 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 OR52B5P-202ENST00000641118 1110 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 CUBNP3-201ENST00000457461 1784 ntBASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
SHKBP1Q8TBC3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 AP002370.1-201ENST00000528055 1602 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 FRG1BP-201ENST00000278882 761 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 FRG1CP-201ENST00000358464 769 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 RNA5SP477-201ENST00000362639 119 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 RNU1-134P-201ENST00000362935 165 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 RNU1-49P-201ENST00000363468 159 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 RNU6-660P-201ENST00000364566 109 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 RNU6-707P-201ENST00000364647 95 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 U3.43-201ENST00000410734 213 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 MTND4LP17-201ENST00000414607 293 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 ELOCP14-201ENST00000428070 331 ntBASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.52□□□□□ -1.37
SHKBP1Q8TBC3 AL035458.1-201ENST00000433096 585 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms