Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AL118496.1-201ENST00000440201 1812 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 RNA5SP326-201ENST00000363209 110 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 RNA5SP394-201ENST00000364216 119 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 RNU6-707P-201ENST00000364647 95 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AL590084.1-201ENST00000407885 387 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 RNU6-603P-201ENST00000411403 107 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 GTF2IP23-201ENST00000423746 351 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 LINC02210-201ENST00000444561 288 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC005297.1-201ENST00000444765 862 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AL450996.1-201ENST00000445574 1202 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AL596266.1-201ENST00000448132 400 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 OR52E7P-201ENST00000452394 933 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 USP9YP25-201ENST00000457708 443 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 PPIAP21-201ENST00000464473 501 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC008885.2-201ENST00000509506 930 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC092593.2-201ENST00000513866 913 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 IGLV3-24-201ENST00000517477 197 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 MRPS16P1-201ENST00000523462 412 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC023538.1-201ENST00000534576 736 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC122688.1-201ENST00000541494 223 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC023050.2-201ENST00000544968 387 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 HSPE1P2-201ENST00000554777 306 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AP003973.1-201ENST00000604639 691 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC100767.2-201ENST00000604840 693 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC093783.1-201ENST00000612976 329 ntBASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.4□□□□□ -1.54
KRT78Q8N1N4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
KRT78Q8N1N4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AP005901.5-201ENST00000545779 1796 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AC109446.4-201ENST00000623235 2755 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 Z99496.1-201ENST00000469424 1477 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AL512646.1-201ENST00000269395 1077 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 GAPDHP24-201ENST00000328713 983 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 EI24P3-201ENST00000399046 1062 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 GAPDHP42-201ENST00000406848 981 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AL450992.3-201ENST00000413192 568 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AC138761.5-201ENST00000433967 325 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AC006335.2-201ENST00000437993 330 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 IGBP1P3-201ENST00000447449 1000 ntBASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.39□□□□□ -1.55
KRT78Q8N1N4 AL591363.1-201ENST00000450091 483 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms