Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 AC006484.1-201ENST00000435086 1884 ntBASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCN4BQ8IWT1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC007996.1-201ENST00000620414 2821 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 IRF5P1-201ENST00000504852 2164 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 CASC19-260ENST00000641828 2001 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL627171.1-201ENST00000618845 1308 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 RN7SKP95-201ENST00000362860 303 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 RNU5B-4P-201ENST00000363508 111 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 SNORA48.4-201ENST00000391089 134 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL139128.1-201ENST00000413921 941 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 DEFB130D-201ENST00000426866 237 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC104837.2-201ENST00000427236 424 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL035458.1-201ENST00000433096 585 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL137845.2-201ENST00000444292 988 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 BX842559.2-201ENST00000451418 605 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 RPS20P4-201ENST00000461659 355 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 RN7SL319P-201ENST00000480656 221 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 HMGB1P38-201ENST00000490557 577 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC140172.1-201ENST00000502928 141 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 RNA5SP43-201ENST00000516559 110 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 HIGD1AP18-201ENST00000520730 278 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 BRD9P1-201ENST00000529855 560 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 SULT1C2P2-201ENST00000562517 294 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 MEMO1P5-201ENST00000604810 406 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AP002802.2-201ENST00000605877 235 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 AL590396.4-201ENST00000636779 956 ntBASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
SCN4BQ8IWT1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC103591.2-201ENST00000265259 766 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 RNU5E-10P-201ENST00000363506 118 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 Z97832.1-201ENST00000402490 328 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AL035079.1-201ENST00000405210 287 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 EIF4A1P1-201ENST00000420241 934 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 OR2AM1P-201ENST00000422137 422 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 HSPD1P12-201ENST00000429127 1069 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC009238.2-201ENST00000431026 355 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC005189.1-201ENST00000431286 310 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC092447.2-201ENST00000435487 669 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms