Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC093535.2-201ENST00000624769 2326 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC067945.1-201ENST00000342609 618 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 RNU1-44P-201ENST00000384453 163 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 RNU6-178P-201ENST00000384631 104 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 ATP5F1P2-201ENST00000398143 760 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 FCF1P5-201ENST00000406490 482 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 EIF4A1P3-201ENST00000411521 244 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AP000534.2-201ENST00000412729 568 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 GSTM3P2-201ENST00000412746 530 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 OR2X1P-201ENST00000421144 687 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC079355.1-201ENST00000421770 223 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 ARAFP1-201ENST00000422172 605 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AL935212.3-201ENST00000450729 284 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 ISCUP1-201ENST00000454451 448 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC022336.1-201ENST00000475510 337 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 RN7SKP66-201ENST00000516681 231 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 HMGB3P26-201ENST00000560051 582 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 FAM106CP-201ENST00000582212 507 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 ADAD1P2-201ENST00000588476 646 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 FAM60CP-201ENST00000591086 664 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC023762.1-201ENST00000603280 584 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC015922.4-201ENST00000612568 690 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AL138721.1-201ENST00000616756 179 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 LINC01739-205ENST00000641890 573 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC015813.6-201ENST00000624409 5808 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 AC135352.1-201ENST00000506173 1418 ntBASIC4.54□□□□□ -1.68
NUDCD3Q8IVD9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 MTCO1P11-201ENST00000429111 1528 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 RPL23P2-201ENST00000320371 421 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC019155.1-201ENST00000382242 574 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AL391361.1-201ENST00000405580 489 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 NCSTNP1-201ENST00000406229 144 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 VN1R8P-201ENST00000407739 893 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 SKP1P3-201ENST00000429280 487 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 MAPRE1P3-201ENST00000435438 796 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AURKAPS2-201ENST00000454983 333 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 RN7SL30P-201ENST00000488416 306 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC147055.1-201ENST00000509261 750 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 SCARNA21.2-201ENST00000516600 166 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC022832.1-201ENST00000530718 645 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC103792.1-201ENST00000603591 919 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AP002360.3-201ENST00000607673 710 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC021106.3-201ENST00000623925 531 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 AC027290.2-201ENST00000623210 18662 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 OR10AB1P-202ENST00000641219 1686 ntBASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUDCD3Q8IVD9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.53□□□□□ -1.69
NUDCD3Q8IVD9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 PABPC1P6-201ENST00000445594 1829 ntBASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 RNU1-63P-201ENST00000383902 164 ntBASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 MT-RNR1-201ENST00000389680 954 ntBASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 AC073335.1-201ENST00000427776 363 ntBASIC4.52□□□□□ -1.69
NUDCD3Q8IVD9 DYNLL1P7-201ENST00000429273 258 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms