Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 FABP3P2-201ENST00000453169 399 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AL121877.1-201ENST00000453704 622 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AL590639.1-201ENST00000456484 337 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC087312.1-201ENST00000471411 480 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AL117692.1-201ENST00000494283 713 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 SETP14-201ENST00000497538 873 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC114324.2-202ENST00000503812 134 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC017037.1-201ENST00000508460 471 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 UGT2A3P7-201ENST00000510485 734 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AF131216.2-201ENST00000512316 564 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 RNU6-1225P-201ENST00000516336 65 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 OR4A45P-201ENST00000529954 901 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC073916.1-201ENST00000545095 130 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 HIF1AP1-201ENST00000553642 175 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC010547.7-201ENST00000570323 333 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC020914.6-201ENST00000594327 272 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 RPL7AP69-201ENST00000595306 806 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 BNIP3P8-201ENST00000597863 560 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC114477.1-201ENST00000605097 605 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC093788.1-201ENST00000609356 927 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 TCL6_3.1-201ENST00000619064 137 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC007342.8-201ENST00000623278 678 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 CRYM-AS1-204ENST00000637983 556 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AL596275.2-208ENST00000641192 594 ntBASIC5.9□□□□□ -1.46
ATG4DQ86TL0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ATG4DQ86TL0 AC105749.1-201ENST00000631338 2008 ntBASIC5.9□□□□□ -1.47
ATG4DQ86TL0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 DCAF13P3-201ENST00000561147 1334 ntBASIC5.9□□□□□ -1.47
ATG4DQ86TL0 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 MTND5P16-201ENST00000460269 1703 ntBASIC5.9□□□□□ -1.47
ATG4DQ86TL0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 AC105235.1-201ENST00000623208 1816 ntBASIC5.9□□□□□ -1.47
ATG4DQ86TL0 AC110373.1-201ENST00000505994 3505 ntBASIC5.9□□□□□ -1.47
ATG4DQ86TL0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.9□□□□□ -1.47
ATG4DQ86TL0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC022034.1-201ENST00000512867 2156 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 SNORA51.2-201ENST00000364595 132 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 RNA5SP85-201ENST00000365378 119 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 SNORA64.3-201ENST00000365647 134 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 RNU6-1160P-201ENST00000384546 104 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 RAB28P1-201ENST00000411517 641 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 JKAMPP1-201ENST00000413804 919 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 LINC01347-201ENST00000417964 355 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 RPS27AP14-201ENST00000422868 454 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 MTCO1P54-201ENST00000430139 712 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 SEPT7P5-201ENST00000434048 306 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC092106.2-201ENST00000436597 487 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 RPL29P23-201ENST00000486188 442 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 RPL15P21-201ENST00000495592 567 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC010486.1-201ENST00000511793 424 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL121579.2-201ENST00000555466 590 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms