Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL807761.1-201ENST00000417622 171 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC017019.1-201ENST00000426129 261 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 DPY19L1P2-201ENST00000426647 915 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 USP9YP9-201ENST00000429406 715 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC112498.1-201ENST00000444401 332 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL354714.3-201ENST00000447284 493 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 NOP56P2-201ENST00000447491 769 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 CCRL1P1-201ENST00000449542 1053 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RN7SL443P-201ENST00000464331 290 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC006463.2-201ENST00000473326 348 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 RN7SL860P-201ENST00000473738 223 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RN7SL319P-201ENST00000480656 221 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC005912.1-201ENST00000495392 255 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC138938.1-201ENST00000515431 782 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 RNU6-319P-201ENST00000516025 108 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC025857.1-201ENST00000525252 377 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 PSMA6P4-201ENST00000603247 718 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC011626.1-201ENST00000604710 562 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC000123.2-201ENST00000623124 461 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCXQ7RTU7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.22□□□□□ -1.89
SCXQ7RTU7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.22□□□□□ -1.89
SCXQ7RTU7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SCXQ7RTU7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SCXQ7RTU7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SCXQ7RTU7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCXQ7RTU7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCXQ7RTU7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCXQ7RTU7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC007738.1-201ENST00000413892 348 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC013429.2-201ENST00000418798 781 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AL358176.3-201ENST00000420757 454 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC073464.3-201ENST00000422564 712 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 RPS26P4-201ENST00000431743 355 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 CEACAMP9-201ENST00000442990 513 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AL031584.1-201ENST00000447169 754 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC063943.1-201ENST00000465434 453 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC112206.1-201ENST00000468416 477 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 RN7SL738P-201ENST00000470264 297 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 RN7SL814P-201ENST00000487715 300 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 IGLV2-34-201ENST00000490007 283 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 RN7SL205P-201ENST00000490174 284 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC108043.1-201ENST00000512696 574 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 SNORD116-26-201ENST00000516006 96 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 SNORA26.10-201ENST00000516427 141 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms