Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
OTOP1Q7RTM1 AC068870.1-201ENST00000563737 2455 ntBASIC6.3□□□□□ -1.4
OTOP1Q7RTM1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.3□□□□□ -1.4
OTOP1Q7RTM1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 DDX18P5-201ENST00000534547 1306 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 NACA3P-201ENST00000359690 648 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 U3.10-201ENST00000364459 214 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 RNU6-549P-201ENST00000384433 107 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 RPS16P5-201ENST00000406501 404 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 RN7SKP126-201ENST00000411143 300 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC239798.3-201ENST00000454459 408 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 OR5AK3P-201ENST00000527486 1297 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 OR11H3P-201ENST00000554547 982 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 ATP5J2P6-201ENST00000565203 266 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC095057.3-201ENST00000567102 1157 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC022662.1-201ENST00000580252 331 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 NBR2-204ENST00000587322 63 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC018638.7-201ENST00000605836 1114 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 FRG1HP-204ENST00000617940 757 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC139769.3-201ENST00000618383 175 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 AC091905.4-201ENST00000623432 202 ntBASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
OTOP1Q7RTM1 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AL121886.1-201ENST00000358609 435 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 MIR23A-201ENST00000385245 73 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 HMGB3P18-201ENST00000406327 590 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 OR4K6P-201ENST00000416478 897 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC007161.1-204ENST00000423039 460 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC008072.1-201ENST00000434254 824 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 NECAP1P2-201ENST00000455668 727 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 ANKRD26P4-201ENST00000455755 950 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 NDUFA12P1-201ENST00000455914 406 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC007537.2-201ENST00000472093 511 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 RPL23AP37-201ENST00000479658 549 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC098583.1-201ENST00000480875 255 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 GAPDHP62-201ENST00000515313 990 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 MTCO3P15-201ENST00000526563 574 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC008126.1-201ENST00000549019 480 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 NMNAT1P5-201ENST00000559657 841 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AP001542.2-201ENST00000593141 364 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 VN1R83P-201ENST00000595685 445 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 MRPS35P3-201ENST00000603189 709 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 AL161616.1-201ENST00000611867 286 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 MIR6758-201ENST00000620653 63 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 MIR7703-201ENST00000620784 77 ntBASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
OTOP1Q7RTM1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms