Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 LRRC6P1-201ENST00000532188 885 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 NANOGNBP2-201ENST00000544753 553 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC025260.1-201ENST00000548858 430 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC107958.1-201ENST00000556576 290 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC010547.6-201ENST00000571789 193 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 RN7SL708P-201ENST00000580952 299 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC013468.1-201ENST00000608680 598 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 MIR6071-201ENST00000616741 78 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AL355493.4-201ENST00000618530 292 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC123767.1-202ENST00000620407 817 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC011330.2-201ENST00000621680 635 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC015660.5-201ENST00000623238 564 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC007342.8-201ENST00000623278 678 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 CU639417.4-201ENST00000623928 207 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC017104.5-201ENST00000637647 639 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHFQ7M4L6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHFQ7M4L6 GTF2H2B-203ENST00000508065 1432 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AC099786.3-201ENST00000565735 1410 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 AP000542.2-201ENST00000623199 6179 ntBASIC4.71□□□□□ -1.66
SHFQ7M4L6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL133388.1-201ENST00000404509 287 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AP000357.1-201ENST00000409926 1165 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 RN7SKP240-201ENST00000410583 375 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 OR6E1P-201ENST00000414424 923 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 SDHDP6-201ENST00000414693 480 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL596448.1-201ENST00000415024 392 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 NANOGP4-201ENST00000427230 913 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 MTND6P12-201ENST00000428247 522 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 CYCSP11-201ENST00000436426 315 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC002504.1-201ENST00000438281 691 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC104634.1-201ENST00000452720 462 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC010627.1-201ENST00000503819 1294 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 RFPL4AP5-201ENST00000514977 504 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL671862.1-201ENST00000515851 349 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 RN7SKP70-201ENST00000516655 271 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 MTND2P38-201ENST00000522536 667 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 DUXAP5-201ENST00000529668 529 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 ATP5F1P7-201ENST00000567330 760 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC015720.2-201ENST00000567709 334 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 MIR548Y-201ENST00000582739 110 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC048344.4-201ENST00000619744 527 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC138907.10-201ENST00000623708 983 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHFQ7M4L6 MTCO1P15-201ENST00000529569 1526 ntBASIC4.7□□□□□ -1.66
SHFQ7M4L6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.7□□□□□ -1.66
SHFQ7M4L6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms