Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 RLIMP1-201ENST00000339626 1680 ntBASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 MIR921-201ENST00000401133 56 ntBASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 snoU13.22-201ENST00000459428 104 ntBASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 AC053481.4-201ENST00000583164 216 ntBASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 AL160290.3-201ENST00000604869 165 ntBASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 AC017104.4-201ENST00000636283 1592 ntBASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 ENSAP1-201ENST00000392855 326 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 RNA5SP249-201ENST00000516127 99 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 SNORA67.7-201ENST00000516664 135 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 DYNLL1P4-201ENST00000549314 266 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 GTF2IP22-201ENST00000554443 182 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 AC234782.5-201ENST00000617723 324 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 AL356863.1-201ENST00000623378 1080 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CDC42BPAQ5VT25 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 EIF4A1P1-201ENST00000420241 934 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC115285.1-201ENST00000424879 736 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 MRPL48P1-201ENST00000445390 636 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 RPL35AP15-201ENST00000468042 339 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC146944.2-203ENST00000502493 354 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC139495.1-202ENST00000513164 354 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC112484.5-201ENST00000624189 228 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 KCTD9P2-201ENST00000512203 1013 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AP005901.4-201ENST00000577336 569 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 TET1P1-201ENST00000426627 2301 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 AP001157.1-201ENST00000550837 2339 ntBASIC6.53□□□□□ -1.36
CDC42BPAQ5VT25 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 OR11H4-201ENST00000315409 1082 ntBASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 RNU1-83P-201ENST00000363426 164 ntBASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 RN7SKP182-201ENST00000410772 298 ntBASIC6.52□□□□□ -1.37
CDC42BPAQ5VT25 RPS26P4-201ENST00000431743 355 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms