Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.3□□□□□ -1.72
RFX4Q33E94 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX4Q33E94 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX4Q33E94 OR1AB1P-201ENST00000585564 761 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC009303.3-201ENST00000591103 736 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC006116.3-201ENST00000592968 361 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC023762.1-201ENST00000603280 584 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC023813.4-201ENST00000607580 580 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AL135786.2-201ENST00000608422 615 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AL138721.1-201ENST00000616756 179 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC091905.2-201ENST00000623143 306 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.3□□□□□ -1.72
RFX4Q33E94 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.3□□□□□ -1.72
RFX4Q33E94 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RFX4Q33E94 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RFX4Q33E94 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX4Q33E94 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 MTND4P26-201ENST00000415971 1359 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFX4Q33E94 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFX4Q33E94 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFX4Q33E94 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFX4Q33E94 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.29□□□□□ -1.72
RFX4Q33E94 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFX4Q33E94 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFX4Q33E94 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 AC067945.1-201ENST00000342609 618 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AC092642.1-201ENST00000392417 425 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 FCF1P5-201ENST00000406490 482 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.29□□□□□ -1.72
RFX4Q33E94 AC114755.2-201ENST00000413520 361 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 ATG4AP1-201ENST00000416893 538 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AC062016.2-201ENST00000420950 676 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AL590609.2-201ENST00000421430 368 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 RPS12P5-201ENST00000423449 371 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AL645608.4-201ENST00000423619 154 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AC073335.1-201ENST00000427776 363 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AL138787.1-202ENST00000437804 898 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 RPL7P33-201ENST00000444159 742 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.29□□□□□ -1.72
RFX4Q33E94 SLC25A18P1-201ENST00000449385 454 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 FCF1P7-201ENST00000451185 558 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 OR6C72P-201ENST00000451403 892 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AC090142.1-201ENST00000465776 462 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 BX284632.1-201ENST00000478218 541 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.29□□□□□ -1.72
RFX4Q33E94 RNA5SP92-201ENST00000516437 110 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 RN7SKP66-201ENST00000516681 231 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 IGLV3-26-201ENST00000520756 302 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 BUD31P1-201ENST00000521828 359 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 OR10G5P-201ENST00000532733 358 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 HAUS8P1-201ENST00000549005 542 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 RN7SL802P-201ENST00000577858 299 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 MIR5699-201ENST00000578903 90 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 MIR6826-201ENST00000617808 98 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AC015908.5-201ENST00000623289 343 ntBASIC4.29□□□□□ -1.72
RFX4Q33E94 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.29□□□□□ -1.72
RFX4Q33E94 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.29□□□□□ -1.72
RFX4Q33E94 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RFX4Q33E94 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFX4Q33E94 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RFX4Q33E94 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFX4Q33E94 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFX4Q33E94 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFX4Q33E94 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFX4Q33E94 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFX4Q33E94 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFX4Q33E94 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.28□□□□□ -1.72
RFX4Q33E94 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 SNORA51.1-201ENST00000363243 140 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
RFX4Q33E94 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AL078604.1-201ENST00000404609 466 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 RN7SKP273-201ENST00000411392 314 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 CASKP1-201ENST00000412870 582 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AC096644.3-201ENST00000416788 338 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 VN1R31P-201ENST00000417498 730 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 TPTE2P1-204ENST00000435256 593 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AC234781.3-201ENST00000452540 973 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 MTND6P32-201ENST00000457611 483 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 snoU109.6-201ENST00000516831 118 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms