Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC110994.2-201ENST00000635481 492 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC022034.1-201ENST00000512867 2156 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDH1Q08174 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC079097.1-201ENST00000512187 1399 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
PCDH1Q08174 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDH1Q08174 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDH1Q08174 CASC19-228ENST00000641414 1684 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDH1Q08174 MAPK10-261ENST00000641050 3109 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC011455.2-201ENST00000599320 3336 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDH1Q08174 IMMTP1-201ENST00000435590 2219 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 OR4A15-201ENST00000314706 1035 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 Y_RNA.279-201ENST00000364763 95 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 Y_RNA.409-201ENST00000383990 98 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 RNU6-692P-201ENST00000384496 107 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC026310.1-201ENST00000396004 378 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AL359694.1-201ENST00000403247 604 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AL136100.1-201ENST00000407696 330 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AL513185.2-201ENST00000425543 193 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC127526.2-201ENST00000426436 775 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 RPS27AP15-201ENST00000447672 466 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC002075.1-201ENST00000457396 676 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 RN7SL372P-201ENST00000461982 298 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDH1Q08174 RPS4XP17-201ENST00000479057 754 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 MTCO3P9-201ENST00000506989 781 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC117522.3-201ENST00000507974 584 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDH1Q08174 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 AL512310.1-201ENST00000548639 172 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 RNU6-84P-201ENST00000607737 102 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC018690.1-201ENST00000608144 626 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC009233.1-201ENST00000616477 371 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 MIR7854-201ENST00000620068 65 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC006065.6-201ENST00000625201 545 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC026634.1-201ENST00000634369 198 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDH1Q08174 HSPA8P17-201ENST00000427029 1382 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 RBPJP6-201ENST00000411556 1431 ntBASIC6.38□□□□□ -1.39
PCDH1Q08174 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDH1Q08174 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDH1Q08174 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDH1Q08174 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AL139384.2-201ENST00000613809 3590 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms