Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL049737.1-201ENST00000413920 1403 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 CASC19-221ENST00000641309 1382 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC104446.1-201ENST00000613728 1321 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC005294.1-201ENST00000355509 281 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 HSPA8P15-201ENST00000401676 786 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC092745.2-202ENST00000411880 369 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 Z93019.1-201ENST00000416450 973 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC073310.1-201ENST00000423226 1033 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 MTND2P11-201ENST00000423638 648 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 UBE2D3P3-201ENST00000426992 425 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC020890.1-201ENST00000491837 504 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 OR5H3P-201ENST00000502817 919 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 RPEP1-201ENST00000504507 658 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN1BQ07699 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 SNORD46.2-201ENST00000516021 102 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC010306.1-201ENST00000523223 1117 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC090819.1-201ENST00000523800 1111 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 SOX5P1-201ENST00000524155 1127 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 C1DP5-201ENST00000525775 383 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 OR4R2P-201ENST00000530815 597 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC015911.5-201ENST00000587076 451 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN1BQ07699 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC100767.2-201ENST00000604840 693 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC026741.1-201ENST00000605892 482 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC108865.2-201ENST00000606881 432 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC006213.5-201ENST00000619673 288 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC132068.1-201ENST00000623805 459 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 AC132825.7-201ENST00000638744 335 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SCN1BQ07699 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN1BQ07699 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 SEC63P2-201ENST00000503863 1939 ntBASIC4.58□□□□□ -1.68
SCN1BQ07699 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.58□□□□□ -1.68
SCN1BQ07699 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC006210.2-201ENST00000367074 1545 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SCN1BQ07699 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 HSPA8P18-201ENST00000439846 1928 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SCN1BQ07699 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SCN1BQ07699 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 OR52E6-202ENST00000379946 954 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 RNU2-65P-201ENST00000410162 185 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC004022.2-201ENST00000413824 193 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 MTCO2P1-201ENST00000424648 477 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN1BQ07699 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.57□□□□□ -1.68
SCN1BQ07699 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AL356981.1-201ENST00000454879 684 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AC093166.2-201ENST00000455969 1017 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC108751.2-201ENST00000469993 231 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 SETP6-201ENST00000479329 568 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 NIP7P2-201ENST00000485801 544 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 MTATP6P22-201ENST00000507369 598 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms