Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
GABPAQ06546 AC015813.6-201ENST00000624409 5808 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
GABPAQ06546 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPAQ06546 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPAQ06546 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPAQ06546 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GABPAQ06546 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GABPAQ06546 AC097063.1-201ENST00000426714 1797 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 UBBP2-201ENST00000376781 231 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
GABPAQ06546 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.32□□□□□ -1.56
GABPAQ06546 AL592291.1-201ENST00000403830 352 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AL356968.2-201ENST00000412769 1257 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.32□□□□□ -1.56
GABPAQ06546 RPL21P108-201ENST00000413857 481 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPAQ06546 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.32□□□□□ -1.56
GABPAQ06546 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 DHFRP3-201ENST00000455595 559 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 RN7SL98P-201ENST00000462271 300 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPAQ06546 RN7SL810P-201ENST00000493031 276 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.32□□□□□ -1.56
GABPAQ06546 RNA5SP464-201ENST00000516251 108 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 IGLVIV-65-201ENST00000517313 360 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPAQ06546 IGKV2D-10-201ENST00000520194 281 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 PARP1P2-201ENST00000556806 195 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
GABPAQ06546 AC005520.3-201ENST00000602874 370 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AC020634.1-201ENST00000608701 549 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AC016717.3-201ENST00000624730 554 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPAQ06546 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPAQ06546 OR51H2P-202ENST00000641424 3046 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 AL672167.1-204ENST00000641875 3017 ntBASIC5.32□□□□□ -1.56
GABPAQ06546 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPAQ06546 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
GABPAQ06546 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPAQ06546 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPAQ06546 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
GABPAQ06546 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GABPAQ06546 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.31□□□□□ -1.56
GABPAQ06546 PROS2P-201ENST00000474651 1951 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.31□□□□□ -1.56
GABPAQ06546 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
GABPAQ06546 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
GABPAQ06546 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.31□□□□□ -1.56
GABPAQ06546 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GABPAQ06546 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GABPAQ06546 AC008033.1-201ENST00000216407 1162 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 AL049693.1-201ENST00000402760 611 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 AC098592.2-201ENST00000413158 265 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.31□□□□□ -1.56
GABPAQ06546 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.31□□□□□ -1.56
GABPAQ06546 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.31□□□□□ -1.56
GABPAQ06546 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.31□□□□□ -1.56
GABPAQ06546 AL672167.3-201ENST00000465951 960 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 AC010618.1-201ENST00000469924 477 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 MTND3P6-201ENST00000485242 339 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 HMGB3P16-201ENST00000508037 287 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GABPAQ06546 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.31□□□□□ -1.56
GABPAQ06546 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
GABPAQ06546 AC010487.1-201ENST00000594408 1172 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 AC012557.1-201ENST00000607115 611 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GABPAQ06546 MIR6716-201ENST00000613413 80 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.31□□□□□ -1.56
GABPAQ06546 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.31□□□□□ -1.56
GABPAQ06546 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
GABPAQ06546 STX3-208ENST00000641815 3236 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 AL355852.1-201ENST00000454081 1771 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 AC068870.3-201ENST00000625077 2536 ntBASIC5.31□□□□□ -1.56
GABPAQ06546 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GABPAQ06546 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.31□□□□□ -1.56
GABPAQ06546 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GABPAQ06546 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GABPAQ06546 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GABPAQ06546 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GABPAQ06546 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GABPAQ06546 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GABPAQ06546 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GABPAQ06546 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.3□□□□□ -1.56
GABPAQ06546 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.3□□□□□ -1.56
GABPAQ06546 AC093909.5-201ENST00000621839 1799 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GABPAQ06546 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.3□□□□□ -1.56
GABPAQ06546 OR5P1P-201ENST00000299512 925 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GABPAQ06546 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms