Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 CASC19-284ENST00000642142 1868 ntBASIC5.06□□□□□ -1.6
RAE1P78406 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 AC100871.1-201ENST00000507871 1456 ntBASIC5.06□□□□□ -1.6
RAE1P78406 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.05□□□□□ -1.6
RAE1P78406 AC020633.1-201ENST00000468439 2247 ntBASIC5.05□□□□□ -1.6
RAE1P78406 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 AL137100.1-201ENST00000556703 1620 ntBASIC5.05□□□□□ -1.6
RAE1P78406 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
RAE1P78406 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RAE1P78406 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 AC017079.1-201ENST00000333650 415 ntBASIC5.05□□□□□ -1.6
RAE1P78406 RNU1-146P-201ENST00000364015 165 ntBASIC5.05□□□□□ -1.6
RAE1P78406 SNORA62.2-201ENST00000364672 152 ntBASIC5.05□□□□□ -1.6
RAE1P78406 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 HMGB3P7-201ENST00000400214 611 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 COX5BP7-201ENST00000414780 274 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.05□□□□□ -1.6
RAE1P78406 AC090018.1-201ENST00000434369 367 ntBASIC5.05□□□□□ -1.6
RAE1P78406 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 CYCSP11-201ENST00000436426 315 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AL008629.1-201ENST00000438615 184 ntBASIC5.05□□□□□ -1.6
RAE1P78406 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 AL929288.2-201ENST00000446368 407 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC005002.1-201ENST00000447458 540 ntBASIC5.05□□□□□ -1.6
RAE1P78406 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 AC144530.1-201ENST00000452862 555 ntBASIC5.05□□□□□ -1.6
RAE1P78406 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.05□□□□□ -1.6
RAE1P78406 RNU7-27P-201ENST00000459281 62 ntBASIC5.05□□□□□ -1.6
RAE1P78406 RN7SL51P-201ENST00000468230 285 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC100832.1-201ENST00000471945 383 ntBASIC5.05□□□□□ -1.6
RAE1P78406 PPIAP19-201ENST00000486414 492 ntBASIC5.05□□□□□ -1.6
RAE1P78406 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.05□□□□□ -1.6
RAE1P78406 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.05□□□□□ -1.6
RAE1P78406 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.05□□□□□ -1.6
RAE1P78406 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.05□□□□□ -1.6
RAE1P78406 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 AC022404.1-201ENST00000555320 273 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.05□□□□□ -1.6
RAE1P78406 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 AL354943.1-201ENST00000572103 781 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 AC022662.1-201ENST00000580252 331 ntBASIC5.05□□□□□ -1.6
RAE1P78406 PRPF19P1-201ENST00000584766 898 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 AL451064.1-201ENST00000607718 471 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC126175.1-201ENST00000617041 758 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AL691477.1-201ENST00000624398 162 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AL512506.2-201ENST00000624472 458 ntBASIC5.05□□□□□ -1.6
RAE1P78406 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 AC073869.7-201ENST00000640874 297 ntBASIC5.05□□□□□ -1.6
RAE1P78406 ZNF663P-202ENST00000641770 1131 ntBASIC5.05□□□□□ -1.6
RAE1P78406 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 MTCO1P7-201ENST00000419523 1542 ntBASIC5.05□□□□□ -1.6
RAE1P78406 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.05□□□□□ -1.6
RAE1P78406 VPS35P1-201ENST00000563400 1518 ntBASIC5.05□□□□□ -1.6
RAE1P78406 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.05□□□□□ -1.6
RAE1P78406 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAE1P78406 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.05□□□□□ -1.6
RAE1P78406 MTND5P31-201ENST00000419366 1374 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC005261.4-201ENST00000600047 1385 ntBASIC5.04□□□□□ -1.6
RAE1P78406 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RAE1P78406 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms