Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AL935212.3-201ENST00000450729 284 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 VN1R32P-201ENST00000452234 905 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 AC094085.1-201ENST00000468914 584 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 SYT14P1-201ENST00000481459 721 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXA3P55318 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
FOXA3P55318 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXA3P55318 DEFB109D-201ENST00000529497 240 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXA3P55318 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXA3P55318 HNRNPCP4-201ENST00000571636 900 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 FKBP1AP1-201ENST00000594588 318 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 AC103792.1-201ENST00000603591 919 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 AC073137.1-201ENST00000605636 634 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXA3P55318 AC078899.5-201ENST00000612475 178 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 AC103858.2-201ENST00000621471 543 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXA3P55318 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXA3P55318 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXA3P55318 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
FOXA3P55318 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXA3P55318 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
FOXA3P55318 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 MAPK10-253ENST00000641010 4072 ntBASIC3.38□□□□□ -1.87
FOXA3P55318 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXA3P55318 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXA3P55318 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 AC125257.1-201ENST00000560400 2930 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXA3P55318 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXA3P55318 RNU1-63P-201ENST00000383902 164 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AL450992.3-201ENST00000413192 568 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 PRELID3BP10-201ENST00000431957 584 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXA3P55318 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXA3P55318 H2AFZP5-201ENST00000446960 382 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 RPL31P15-201ENST00000449770 338 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC079168.2-201ENST00000453977 416 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 RPS5P7-201ENST00000456664 608 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 RPL7P39-201ENST00000481157 744 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXA3P55318 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXA3P55318 AC091868.1-201ENST00000508746 304 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC018797.3-201ENST00000513388 1241 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.37□□□□□ -1.87
FOXA3P55318 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXA3P55318 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXA3P55318 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 AC133555.2-201ENST00000550213 292 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.37□□□□□ -1.87
FOXA3P55318 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXA3P55318 AC005726.4-201ENST00000582858 458 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 MIR4691-201ENST00000583764 85 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 BPIFA4P-203ENST00000603168 689 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AL589674.2-201ENST00000604304 337 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 MEMO1P5-201ENST00000604810 406 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC233309.1-201ENST00000619522 751 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 RMST_9.1-201ENST00000619945 193 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC127024.6-201ENST00000621598 424 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 NXPH1-205ENST00000602349 1953 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 AC093311.1-201ENST00000506586 2021 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXA3P55318 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FOXA3P55318 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXA3P55318 AL391684.1-202ENST00000641293 1636 ntBASIC3.37□□□□□ -1.87
FOXA3P55318 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FOXA3P55318 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
FOXA3P55318 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
FOXA3P55318 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXA3P55318 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXA3P55318 AC134882.1-201ENST00000603738 1676 ntBASIC3.36□□□□□ -1.87
FOXA3P55318 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.36□□□□□ -1.87
FOXA3P55318 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXA3P55318 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXA3P55318 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
FOXA3P55318 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
FOXA3P55318 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
FOXA3P55318 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXA3P55318 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXA3P55318 RNU6-1279P-201ENST00000383917 103 ntBASIC3.36□□□□□ -1.87
FOXA3P55318 U3.30-201ENST00000391308 210 ntBASIC3.36□□□□□ -1.87
FOXA3P55318 CXADRP1-201ENST00000398098 1095 ntBASIC3.36□□□□□ -1.87
FOXA3P55318 AL591848.1-201ENST00000413092 322 ntBASIC3.36□□□□□ -1.87
FOXA3P55318 JKAMPP1-201ENST00000413804 919 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms